RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TDRD12Q587J7 1177 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 MDH1BQ5I0G3 518 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 C10orf76Q5T2E6 689 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 GJB7Q6PEY0 223 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 PRSS55Q6UWB4 352 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 IRF2BP2Q7Z5L9 587 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ACOT1Q86TX2 421 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ITIH5Q86UX2 942 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ALYREFQ86V81 257 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TMTC1Q8IUR5 882 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 FUKQ8N0W3 1084 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ELMOD1Q8N336 334 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 Q8N3U1 123 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 EFHBQ8N7U6 833 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TC2NQ8N9U0 490 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TMEM35BQ8NCS4 154 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 C1orf131Q8NDD1 294 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 PDZD8Q8NEN9 1154 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ADAM32Q8TC27 787 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 MICAL1Q8TDZ2 1067 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF606Q8WXB4 792 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 KCTD13Q8WZ19 329 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 OVCA2Q8WZ82 227 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 KAT5Q92993 513 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 MYLPFQ96A32 169 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CYFIP2Q96F07 1278 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TRMT2BQ96GJ1 504 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 VCPIP1Q96JH7 1222 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CALR3Q96L12 384 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 HSFY1Q96LI6 401 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 HEXIM2Q96MH2 286 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TWNKQ96RR1 684 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 SYT11Q9BT88 431 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 DUSP16Q9BY84 665 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TTYH1Q9H313 450 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 SFXN1Q9H9B4 322 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 CRTAC1Q9NQ79 661 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 UXTQ9UBK9 157 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 HMGXB4Q9UGU5 601 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 LCMT1Q9UIC8 334 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 NOCTQ9UK39 431 aaKnown RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 AJAP1Q9UKB5 411 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TSPAN16Q9UKR8 245 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 MTUS1Q9ULD2 1270 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
UPF3B-205ENST00000636792 TIMM13Q9Y5L4 95 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 NUP210Q8TEM1 1887 aaPredicted RBP7.1□□□□□ -1.27
UPF3B-205ENST00000636792 HELZP42694 1942 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 FAM92AA1XBS5 289 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 MYBPHLA2RUH7 354 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 ERVH48-1M5A8F1 160 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 C2CD2LO14523 706 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 CYP26A1O43174 497 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 TGM5O43548 720 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 LILRA1O75019 489 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 XYLBO75191 536 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 FBXO21O94952 628 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 IPO7O95373 1038 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 CYP1A1P04798 512 aaPredicted RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 PDGFRBP09619 1106 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 MYBL1P10243 752 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 HAPLN1P10915 354 aaPredicted RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 MX2P20592 715 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 ACAT1P24752 427 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 LMO2P25791 158 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 CYLC1P35663 651 aaPredicted RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 USP8P40818 1118 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 PSMC1P62191 440 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 NOMO3P69849 1222 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 CYP27A1Q02318 531 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 CENPCQ03188 943 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 ADCY1Q08828 1119 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 SLC18A3Q16572 532 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 DBN1Q16643 649 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 HGSNATQ68CP4 663 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 SCARA3Q6AZY7 606 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 BEND5Q7L4P6 421 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 TAS1R1Q7RTX1 841 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 SLC47A2Q86VL8 602 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 SLC2A14Q8TDB8 520 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 IPO4Q8TEX9 1081 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 SLC22A17Q8WUG5 538 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 IRGQQ8WZA9 623 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 DDX1Q92499 740 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 GTPBP3Q969Y2 492 aaKnown RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 TTLL2Q9BWV7 592 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 PDCL3Q9H2J4 239 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 DPEP3Q9H4B8 488 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 DEF6Q9H4E7 631 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 FBXO44Q9H4M3 255 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 AVENQ9NQS1 362 aaPredicted RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 KRT82Q9NSB4 513 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 ABI2Q9NYB9 513 aaPredicted RBP7.09□□□□□ -1.27
UPF3B-205ENST00000636792 WDR35Q9P2L0 1181 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 GTF3C4Q9UKN8 822 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 YIPF1Q9Y548 306 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 NME7Q9Y5B8 376 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 INSL5Q9Y5Q6 135 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms