RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	DLG1	Q12959	904 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	TMED2	Q15363	201 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ANGEL2	Q5VTE6	544 aa	Known RBP	11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	SNRNP48	Q6IEG0	339 aa	Known RBP	11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	SLC30A10	Q6XR72	485 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ZNF720	Q7Z2F6	126 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ADAT2	Q7Z6V5	191 aa	Known RBP	11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	RHOT2	Q8IXI1	618 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	EXOC8	Q8IYI6	725 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ULK2	Q8IYT8	1036 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	LZTR1	Q8N653	840 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	RIN3	Q8TB24	985 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	GDPD5	Q8WTR4	605 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	SPOCK2	Q92563	424 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ATG4C	Q96DT6	458 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	SENP7	Q9BQF6	1050 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	NEURL2	Q9BR09	285 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	OSBPL10	Q9BXB5	764 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	TEX13B	Q9BXU2	312 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ST6GALNAC4	Q9H4F1	302 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ACAD9	Q9H845	621 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ARHGEF4	Q9NR80	690 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	GPRC5D	Q9NZD1	345 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	COL20A1	Q9P218	1284 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	POLI	Q9UNA4	740 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	ZNF541	Q9H0D2	1346 aa		11.21	□□□□□ -0.61
CHD2-223	ENST00000636306	RLF	Q13129	1914 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306		A0A0G2JMZ2	1700 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306		H0YCG3	227 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306		H3BNX3	289 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	ADCY6	O43306	1168 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	ITM2A	O43736	263 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	AKAP3	O75969	853 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	OCM2	P0CE71	109 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	OCM	P0CE72	109 aa	Predicted RBP	11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	MYCL	P12524	364 aa	Predicted RBP	11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	UCHL3	P15374	230 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	PCSK6	P29122	969 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	HMOX2	P30519	316 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	FDFT1	P37268	417 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	AQP4	P55087	323 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	JAM2	P57087	298 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	CDK18	Q07002	472 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF211	Q13398	564 aa	Predicted RBP	11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	SNAPC2	Q13487	334 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	PTK6	Q13882	451 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	COG2	Q14746	738 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	PLEKHG4	Q58EX7	1191 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	C1orf146	Q5VVC0	180 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	C12orf56	Q8IXR9	622 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	CATSPER1	Q8NEC5	780 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	RFWD2	Q8NHY2	731 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	IL31RA	Q8NI17	732 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	NSUN6	Q8TEA1	469 aa	Known RBP	11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	TMEM174	Q8WUU8	243 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	ALG3	Q92685	438 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	NSMCE3	Q96MG7	304 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	CFAP57	Q96MR6	1250 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	SGIP1	Q9BQI5	828 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	ZSWIM1	Q9BR11	485 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	KLC2	Q9H0B6	622 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	WNT8A	Q9H1J5	351 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	VPS11	Q9H270	941 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	CCDC68	Q9H2F9	335 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	CLK4	Q9HAZ1	481 aa	Known RBP	11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	RRN3	Q9NYV6	651 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	GGA3	Q9NZ52	723 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	GCNT4	Q9P109	453 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	NEU2	Q9Y3R4	380 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	SQOR	Q9Y6N5	450 aa		11.21	□□□□□ -0.62
CHD2-223	ENST00000636306	TTLL13P	A6NNM8	815 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	FCHO1	O14526	889 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	DHX15	O43143	795 aa	Known RBP	11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	TYROBP	O43914	113 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	USP1	O94782	785 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	EGFR	P00533	1210 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	PLS3	P13797	630 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	CDH3	P22223	829 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	NMT1	P30419	496 aa	Known RBP	11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	HOXD13	P35453	343 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	CHKA	P35790	457 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	RARRES1	P49788	294 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	MRPS9	P82933	396 aa	Known RBP	11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	ARL13B	Q3SXY8	428 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	DCDC5	Q6ZRR9	648 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	TMC7	Q7Z402	723 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	TMEM126B	Q8IUX1	230 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	ANKK1	Q8NFD2	765 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	GRK7	Q8WTQ7	553 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	CHPT1	Q8WUD6	406 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC35C1	Q96A29	364 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	TAAR1	Q96RJ0	339 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	CYTH2	Q99418	400 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	MRPL1	Q9BYD6	325 aa	Known RBP	11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	GRIP2	Q9C0E4	1043 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	AGPAT3	Q9NRZ7	376 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	HOXC10	Q9NYD6	342 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	FBXO40	Q9UH90	709 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC7A8	Q9UHI5	535 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms