RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CER1O95813 267 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 EIF2S3P41091 472 aaKnown RBP19.41■□□□□ 0.7
CLN6-212ENST00000636020 PNPLA4P41247 253 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 MATKP42679 507 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 USP46P62068 366 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 PREPLQ4J6C6 727 aaPredicted RBP19.41■□□□□ 0.7
CLN6-212ENST00000636020 C10orf76Q5T2E6 689 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 OSTM1Q86WC4 334 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 TMEM86AQ8N2M4 240 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 TERB1Q8NA31 727 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 TTLL2Q9BWV7 592 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 FOXP1Q9H334 677 aaPredicted RBP19.41■□□□□ 0.7
CLN6-212ENST00000636020 CAPN9O14815 690 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 HOXC11O43248 304 aaPredicted RBP19.4■□□□□ 0.7
CLN6-212ENST00000636020 HCRTO43612 131 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 HUS1O60921 280 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 TRAPPC10P48553 1259 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 SLC12A3P55017 1021 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 ANKRD1Q15327 319 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 IL17AQ16552 155 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 HLA-BQ31612 363 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 EGFLAMQ63HQ2 1017 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 FAM171BQ6P995 826 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 NUDT18Q6ZVK8 323 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 ZCCHC9Q8N567 271 aaKnown RBP19.4■□□□□ 0.7
CLN6-212ENST00000636020 MRGPRX1Q96LB2 322 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 CEP295NLQ96MC4 621 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 ACOX2Q99424 681 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 SLC6A17Q9H1V8 727 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 KCND2Q9NZV8 630 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 BTBD3Q9Y2F9 522 aa19.4■□□□□ 0.7
CLN6-212ENST00000636020 ANKRD63C9JTQ0 380 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 GABRDO14764 452 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 TRIM24O15164 1050 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 OAS1P00973 400 aaKnown RBP19.39■□□□□ 0.69
CLN6-212ENST00000636020 HLA-EP13747 358 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 SCP2P22307 547 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 CD6P30203 668 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 PPP3CCP48454 512 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 POU5F1Q01860 360 aaKnown RBP19.39■□□□□ 0.69
CLN6-212ENST00000636020 PTPRNQ16849 979 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 ARSHQ5FYA8 562 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 BTBD8Q5XKL5 378 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 IL27RAQ6UWB1 636 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 DENND5BQ6ZUT9 1274 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 DDX42Q86XP3 938 aaKnown RBP eCLIP19.39■□□□□ 0.69
CLN6-212ENST00000636020 ERLEC1Q96DZ1 483 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 FCRL3Q96P31 734 aaPredicted RBP19.39■□□□□ 0.69
CLN6-212ENST00000636020 COL6A6A6NMZ7 2263 aa19.39■□□□□ 0.69
CLN6-212ENST00000636020 E2F8A0AVK6 867 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 MEI4A8MW99 385 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 TLX3O43711 291 aaPredicted RBP19.38■□□□□ 0.69
CLN6-212ENST00000636020 PCSK1P29120 753 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 LHX1P48742 406 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 CFHR1Q03591 330 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 HYIQ5T013 277 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 ADALQ6DHV7 355 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 SDE2Q6IQ49 451 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 PCSK4Q6UW60 755 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 VSTM1Q6UX27 236 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 LRRC69Q6ZNQ3 347 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 CENPQQ7L2Z9 268 aaPredicted RBP19.38■□□□□ 0.69
CLN6-212ENST00000636020 CHPFQ8IZ52 775 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 OTUB2Q96DC9 234 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 GABRG3Q99928 467 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 WSB2Q9NYS7 404 aaPredicted RBP19.38■□□□□ 0.69
CLN6-212ENST00000636020 MAGEC2Q9UBF1 373 aaPredicted RBP19.38■□□□□ 0.69
CLN6-212ENST00000636020 AGAP1Q9UPQ3 857 aa19.38■□□□□ 0.69
CLN6-212ENST00000636020 CAPN8A6NHC0 703 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 TISP43B9A030 160 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 K7ENM7 598 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 PLK4O00444 970 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 BCAT2O15382 392 aaPredicted RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 TNFSF14O43557 240 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 ATP2C2O75185 946 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 PLA2G4BP0C869 781 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 BDNFP23560 247 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 POLR2BP30876 1174 aaKnown RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 ZRSR1Q15695 479 aaKnown RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 SCARA3Q6AZY7 606 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 CRELD2Q6UXH1 353 aaPredicted RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 C4orf50Q6ZRC1 276 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 NT5DC4Q86YG4 428 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 CADM4Q8NFZ8 388 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 TOE1Q96GM8 510 aaKnown RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 MIR1-1HGQ9H1L0 117 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 GDAP2Q9NXN4 497 aa19.37■□□□□ 0.69
CLN6-212ENST00000636020 AGO2Q9UKV8 859 aaKnown RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLN6-212ENST00000636020 MUC22E2RYF6 1773 aaPredicted RBP19.37■□□□□ 0.69
CLN6-212ENST00000636020 TEX51A0A1B0GUA7 166 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 ABL1P00519 1130 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 MBL2P11226 248 aaPredicted RBP19.36■□□□□ 0.69
CLN6-212ENST00000636020 NCAM1P13591 858 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 GRIK1P39086 918 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 SUZ12Q15022 739 aaKnown RBP19.36■□□□□ 0.69
CLN6-212ENST00000636020 DHRS13Q6UX07 377 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 KIAA1324Q6UXG2 1013 aaKnown RBP19.36■□□□□ 0.69
CLN6-212ENST00000636020 METTL3Q86U44 580 aaKnown RBP19.36■□□□□ 0.69
CLN6-212ENST00000636020 TMPRSS12Q86WS5 348 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms