RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 FTLP02792 175 aaPredicted RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 SPATA31D3P0C874 917 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 ZKSCAN1P17029 563 aaPredicted RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 TM4SF4P48230 202 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 GPSM2P81274 684 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 IL10RAQ13651 578 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 KRT72Q14CN4 511 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 RRS1Q15050 365 aaKnown RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 UBE3CQ15386 1083 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 CNN3Q15417 329 aaKnown RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 AKNAD1Q5T1N1 836 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 RNF220Q5VTB9 566 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 SPATA31D4Q6ZUB0 917 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 MAEAQ7L5Y9 396 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 DAAM2Q86T65 1068 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 SRLQ86TD4 932 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 TTC7BQ86TV6 843 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 FAM186BQ8IYM0 893 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 VGLL2Q8N8G2 317 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 ENAHQ8N8S7 591 aaPredicted RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 OR2I1PQ8NGU4 316 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 KLHDC4Q8TBB5 520 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 NSUN6Q8TEA1 469 aaKnown RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 PARD3BQ8TEW8 1205 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 RIN2Q8WYP3 895 aaPredicted RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 DPF2Q92785 391 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 CDK5RAP3Q96JB5 506 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 PHACTR3Q96KR7 559 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 UROC1Q96N76 676 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 C7orf25Q9BPX7 421 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 NUP62CLQ9H1M0 184 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 PLCB1Q9NQ66 1216 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 CASS4Q9NQ75 786 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 DMRT3Q9NQL9 472 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 TFCP2L1Q9NZI6 479 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 LRIT1Q9P2V4 623 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 CCNL1Q9UK58 526 aaPredicted RBP3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 ADAM21Q9UKJ8 722 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 PCDHB1Q9Y5F3 818 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 KAT6AQ92794 2004 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 LAMB4A4D0S4 1761 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 ZNF804BA4D1E1 1349 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 ZNF521Q96K83 1311 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 FRS3O43559 492 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 MGEA5O60502 916 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 PQBP1O60828 265 aaKnown RBP3□□□□□ -1.93
SMARCB1-208ENST00000634926 ENDOD1O94919 500 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 BMP15O95972 392 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 MYL3P08590 195 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 RPL17P18621 184 aaKnown RBP3□□□□□ -1.93
SMARCB1-208ENST00000634926 CTSSP25774 331 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 PEX2P28328 305 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 MAP2K6P52564 334 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 TFF2Q03403 129 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 MGAT5Q09328 741 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 IFIT5Q13325 482 aaKnown RBP3□□□□□ -1.93
SMARCB1-208ENST00000634926 ITPK1Q13572 414 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 SEPT2Q15019 361 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 NOMO1Q15155 1222 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 LONRF1Q17RB8 773 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 GRAMD1BQ3KR37 738 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 C19orf54Q5BKX5 351 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 FAM83BQ5T0W9 1011 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 TSHZ3Q63HK5 1081 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 DPP9Q86TI2 863 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 RHOT2Q8IXI1 618 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 DRC7Q8IY82 874 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 DNAJC5GQ8N7S2 189 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 MDM1Q8TC05 714 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 HASPINQ8TF76 798 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 LRTOMTQ8WZ04 291 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 PIGBQ92521 554 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 HOXB13Q92826 284 aaPredicted RBP3□□□□□ -1.93
SMARCB1-208ENST00000634926 KAT5Q92993 513 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 SARAFQ96BY9 339 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 COG3Q96JB2 828 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 CPNE5Q9HCH3 593 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 PTPRHQ9HD43 1115 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 CLCA2Q9UQC9 943 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 DMTF1Q9Y222 760 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 POLHQ9Y253 713 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 PCDHGB6Q9Y5F9 930 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 PCDHA13Q9Y5I0 950 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 NR2E3Q9Y5X4 410 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 SNED1Q8TER0 1413 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 RANBP2P49792 3224 aaKnown RBP3□□□□□ -1.93
SMARCB1-208ENST00000634926 SZT2Q5T011 3432 aa3□□□□□ -1.93
SMARCB1-208ENST00000634926 CCDC88AQ3V6T2 1871 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 ABHD14A-ACY1A0A1B0GW23 586 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 CFAP69A5D8W1 941 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 B5MCH6 92 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 AKR1B10O60218 316 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 TCEA3O75764 348 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 PRSS23O95084 383 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 ARIH2O95376 493 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 LTA4HP09960 611 aaKnown RBP2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 PRR35P0CG20 571 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 SETSIPP0DME0 302 aa2.99□□□□□ -1.93
SMARCB1-208ENST00000634926 CBSLP0DN79 551 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms