RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ECHS1P30084 290 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 ELK3P41970 407 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 GRIA1P42261 906 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 PTGIRP43119 386 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 CPA2P48052 419 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 TKTL1P51854 596 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 ARL4CP56559 192 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 TSHZ1Q6ZSZ6 1077 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 APBB1IPQ7Z5R6 666 aaPredicted RBP7.83□□□□□ -1.16
PKP4-217ENST00000628904 ZNF677Q86XU0 584 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 RNF135Q8IUD6 432 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 C3orf20Q8ND61 904 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 EXD1Q8NHP7 514 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 C16orf70Q9BSU1 422 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 NPHS2Q9NP85 383 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 HAUS2Q9NVX0 235 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 EVPLQ92817 2033 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 EPHB2P29323 1055 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 GMPRP36959 345 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 TAF6P49848 677 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 DEUP1Q05D60 604 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 CRHR2Q13324 411 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 SNX17Q15036 470 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 NOL9Q5SY16 702 aaKnown RBP7.83□□□□□ -1.16
PKP4-217ENST00000628904 FOXR2Q6PJQ5 311 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 TFAP2DQ7Z6R9 452 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 DEFB128Q7Z7B8 93 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 UNC5BQ8IZJ1 945 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 PNPLA1Q8N8W4 532 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 RAET1EQ8TD07 263 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.166e-7■■■□□ 15.4
PKP4-217ENST00000628904 ADAM2Q99965 735 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 VPS11Q9H270 941 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 FZD8Q9H461 694 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 GPBP1L1Q9HC44 474 aaPredicted RBP7.83□□□□□ -1.16
PKP4-217ENST00000628904 LY75O60449 1722 aa7.83□□□□□ -1.16
PKP4-217ENST00000628904 C2orf71A6NGG8 1288 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 STRNO43815 780 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 TSPAN3O60637 253 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 AOC2O75106 756 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 VDRP11473 427 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 RPL22P35268 128 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 ETFBP38117 255 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 FNTAP49354 379 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 CLCNKBP51801 687 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 EIF3BP55884 814 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 AUHQ13825 339 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 RSPH3Q86UC2 560 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 EXOC3L1Q86VI1 746 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 PDCD7Q8N8D1 485 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 HIPK4Q8NE63 616 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 PPTC7Q8NI37 304 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 PDCD6IPQ8WUM4 868 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 EXT2Q93063 718 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 FGD4Q96M96 766 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SNRNP25Q9BV90 132 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 PPP1R12CQ9BZL4 782 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 XYLT2Q9H1B5 865 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 ZFYVE28Q9HCC9 887 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 VTA1Q9NP79 307 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 PCMTD2Q9NV79 361 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 KLHL14Q9P2G3 628 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 AP4E1Q9UPM8 1137 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 LIASO43766 372 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 ATG7O95352 703 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 CYP1A1P04798 512 aaPredicted RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 MCF2P10911 925 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 LMNB2Q03252 620 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SLC20A2Q08357 652 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 CCNG2Q16589 344 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 ZCCHC23Q6ZST2 131 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 RAPH1Q70E73 1250 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 TTC30AQ86WT1 665 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 XYLT1Q86Y38 959 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 TP53INP2Q8IXH6 220 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 RYBPQ8N488 228 aaPredicted RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 FAM111AQ96PZ2 611 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SGIP1Q9BQI5 828 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 DDX20Q9UHI6 824 aaKnown RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 GABRQQ9UN88 632 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 IPPQ9Y573 584 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 WNK3Q9BYP7 1800 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 MYBPHLA2RUH7 354 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 FSCN2O14926 492 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 CYP2F1P24903 491 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SLC26A2P50443 739 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 AP3M2P53677 418 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 RTP1P59025 263 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SOX4Q06945 474 aaPredicted RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 PLEKHA7Q6IQ23 1121 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 PCGF5Q86SE9 256 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SPNS2Q8IVW8 549 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 MCUQ8NE86 351 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 SEPT5Q99719 369 aaPredicted RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 ULBP1Q9BZM6 244 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 XPNPEP3Q9NQH7 507 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 PRDM5Q9NQX1 630 aaPredicted RBP7.82□□□□□ -1.16
PKP4-217ENST00000628904 TMEM59LQ9UK28 342 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms