RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	PPP4R4	Q6NUP7	873 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	C16orf54	Q6UWD8	224 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	UNC5D	Q6UXZ4	953 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	GADL1	Q6ZQY3	521 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	RASGRP2	Q7LDG7	609 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	ANKRD18A	Q8IVF6	992 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	EFCAB13	Q8IY85	973 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	FAM109A	Q8N4B1	249 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	SLC17A8	Q8NDX2	589 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	SEMA6D	Q8NFY4	1073 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	SMO	Q99835	787 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	FAM167B	Q9BTA0	163 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	MAK16	Q9BXY0	300 aa	Known RBP	4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	ARNT2	Q9HBZ2	717 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	PTPRH	Q9HD43	1115 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	RIC8A	Q9NPQ8	531 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	SERPINB13	Q9UIV8	391 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	GTF3C4	Q9UKN8	822 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	ATP8A1	Q9Y2Q0	1164 aa		4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	CFAP20	Q9Y6A4	193 aa	Known RBP	4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.18	□□□□□ -1.74
UBE2A-208	ENST00000628734	SMTNL1	A8MU46	457 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	hCG_1984214	I3L0E3	225 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	F2RL2	O00254	374 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	MTRF1	O75570	445 aa	Known RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	CHEK2	O96017	543 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	MT-CO1	P00395	513 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	RHO	P08100	348 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	IDE	P14735	1019 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	BTF3	P20290	206 aa	Known RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	MAL	P21145	153 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	DRD4	P21917	467 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	CCNC	P24863	283 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	CA8	P35219	290 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	ADD2	P35612	726 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	COPA	P53621	1224 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	BPIFB3	P59826	476 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	UBXN2A	P68543	259 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	LLGL1	Q15334	1064 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	TAF7	Q15545	349 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	SLC5A9	Q2M3M2	681 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	RABL6	Q3YEC7	729 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	CFAP58	Q5T655	872 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	SFMBT2	Q5VUG0	894 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	TTC19	Q6DKK2	380 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	IRGC	Q6NXR0	463 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	NEK10	Q6ZWH5	1172 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	TMEM110	Q86TL2	294 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	LRRC49	Q8IUZ0	686 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	ZNF713	Q8N859	430 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	GSDMB	Q8TAX9	411 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	HDAC7	Q8WUI4	952 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	USP6NL	Q92738	828 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	KAT5	Q92993	513 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	SH3KBP1	Q96B97	665 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	ZBTB10	Q96DT7	871 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	THOC1	Q96FV9	657 aa	Known RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	RSRC1	Q96IZ7	334 aa	Known RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	TEKT5	Q96M29	485 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	SERINC2	Q96SA4	455 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	NELL2	Q99435	816 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	GPR35	Q9HC97	309 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	QPCTL	Q9NXS2	382 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	SPATA7	Q9P0W8	599 aa		4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734		V9GYY5	206 aa	Predicted RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.17	□□□□□ -1.74
UBE2A-208	ENST00000628734	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	SMARCA2	P51531	1590 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	EIF4G1	Q04637	1599 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734		A0A0B4J203	849 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	POLRMT	O00411	1230 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	KIF3B	O15066	747 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	B3GALNT1	O75752	331 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	SOAT2	O75908	522 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	BAIAP3	O94812	1187 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	LATS1	O95835	1130 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TTLL1	O95922	423 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	RPLP2	P05387	115 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	KRT18	P05783	430 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	MYL3	P08590	195 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TSPY4	P0CV99	314 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TSPY10	P0CW01	314 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CBSL	P0DN79	551 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CYP2C19	P33261	490 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CBS	P35520	551 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	PRPH	P41219	470 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	NDUFV1	P49821	464 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	PAPOLA	P51003	745 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	RPS6KA3	P51812	740 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CSE1L	P55060	971 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ADK	P55263	362 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	HSD17B7	P56937	341 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CBX1	P83916	185 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	KIF23	Q02241	960 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	DSC2	Q02487	901 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	SLC10A2	Q12908	348 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	PDIA5	Q14554	519 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms