RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C12orf40Q86WS4 652 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 RLN3Q8WXF3 142 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 FOXD4L4Q8WXT5 416 aaPredicted RBP20.16■□□□□ 0.82
SMN2-215ENST00000628696 PIGKQ92643 395 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 BLZF1Q9H2G9 400 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 SLC39A2Q9NP94 309 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 ZDHHC4Q9NPG8 344 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 ARHGEF4Q9NR80 690 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 BCCIPQ9P287 314 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMN2-215ENST00000628696 UBE4BO95155 1302 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 PATE3B3GLJ2 98 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 SGK1O00141 431 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 GIPC1O14908 333 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 POLR2DO15514 142 aaKnown RBP20.15■□□□□ 0.82
SMN2-215ENST00000628696 EXOC3O60645 756 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 RTN3O95197 1032 aaPredicted RBP20.15■□□□□ 0.82
SMN2-215ENST00000628696 ATICP31939 592 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 CASP4P49662 377 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 SHC2P98077 582 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 BIRC3Q13489 604 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 CNNM4Q6P4Q7 775 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 PGBD3Q8N328 593 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 IL17RCQ8NAC3 791 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 PDZD8Q8NEN9 1154 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 SYAP1Q96A49 352 aaPredicted RBP20.15■□□□□ 0.82
SMN2-215ENST00000628696 KCNK16Q96T55 309 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 SMYD3Q9H7B4 428 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 POLMQ9NP87 494 aaPredicted RBP20.15■□□□□ 0.82
SMN2-215ENST00000628696 TMEM9BQ9NQ34 198 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 TBC1D14Q9P2M4 693 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 ATP8B3O60423 1300 aa20.15■□□□□ 0.82
SMN2-215ENST00000628696 COCHO43405 550 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 FOXD4L6Q3SYB3 417 aaPredicted RBP20.14■□□□□ 0.81
SMN2-215ENST00000628696 EOGTQ5NDL2 527 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 LY6G5CQ5SRR4 150 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 HECTD3Q5T447 861 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 FOXD4L3Q6VB84 417 aaPredicted RBP20.14■□□□□ 0.81
SMN2-215ENST00000628696 NAT16Q8N8M0 369 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 SCAMP5Q8TAC9 235 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 ELMO3Q96BJ8 720 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 GZF1Q9H116 711 aaPredicted RBP20.14■□□□□ 0.81
SMN2-215ENST00000628696 XYLT2Q9H1B5 865 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 SH3BP1Q9Y3L3 701 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 LAMA1P25391 3075 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 PI4KAP42356 2102 aa20.14■□□□□ 0.81
SMN2-215ENST00000628696 E2F8A0AVK6 867 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.13■□□□□ 0.81
SMN2-215ENST00000628696 K7ELQ4 463 aaPredicted RBP20.13■□□□□ 0.81
SMN2-215ENST00000628696 YEATS4O95619 227 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 STAU1O95793 577 aaKnown RBP20.13■□□□□ 0.81
SMN2-215ENST00000628696 EIF2DP41214 584 aaKnown RBP20.13■□□□□ 0.81
SMN2-215ENST00000628696 GRIA2P42262 883 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 AFMP43652 599 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 IRX4P78413 519 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 GAD2Q05329 585 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 ZNF699Q32M78 642 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 UAP1L1Q3KQV9 507 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 ZNF667Q5HYK9 610 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 SCARA5Q6ZMJ2 495 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 ARMCX6Q7L4S7 300 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 LPCAT2Q7L5N7 544 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 WHAMMQ8TF30 809 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 HMGB4Q8WW32 186 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 SPACA7Q96KW9 195 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 NACA2Q9H009 215 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 USP24Q9UPU5 2620 aa20.13■□□□□ 0.81
SMN2-215ENST00000628696 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 TBC1D3BA6NDS4 549 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 IRF1P10914 325 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 TNFRSF4P43489 277 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 EHHADHQ08426 723 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 KNOP1Q1ED39 458 aaKnown RBP20.12■□□□□ 0.81
SMN2-215ENST00000628696 HSF5Q4G112 596 aaPredicted RBP20.12■□□□□ 0.81
SMN2-215ENST00000628696 SH3PXD2AQ5TCZ1 1133 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 BTBD8Q5XKL5 378 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 FAM35AQ86V20 835 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 TMEFF1Q8IYR6 380 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 FRMD1Q8N878 549 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 OLIG1Q8TAK6 271 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 PLEKHO2Q8TD55 490 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 OVCA2Q8WZ82 227 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 CCSER2Q9H7U1 834 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 MAGEF1Q9HAY2 307 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 GMIPQ9P107 970 aa20.12■□□□□ 0.81
SMN2-215ENST00000628696 CGNQ9P2M7 1197 aaKnown RBP20.12■□□□□ 0.81
SMN2-215ENST00000628696 ASCC3Q8N3C0 2202 aaKnown RBP20.11■□□□□ 0.81
SMN2-215ENST00000628696 A0A0A0MRY4 1105 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 TCRBV21S2A2A0A5A6 115 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 AP1G2O75843 785 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 P2RY2P41231 377 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 KIR2DL1P43626 348 aaPredicted RBP20.11■□□□□ 0.81
SMN2-215ENST00000628696 SLC5A3P53794 718 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 ZNF252P-AS1Q0IIN9 211 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 FOXC1Q12948 553 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 CUL4BQ13620 913 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 BMT2Q1RMZ1 405 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 ANO4Q32M45 955 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 PAQR9Q6ZVX9 377 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 ACOT1Q86TX2 421 aa20.11■□□□□ 0.81
SMN2-215ENST00000628696 BBS7Q8IWZ6 715 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms