RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TWNKQ96RR1 684 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 HNRNPABQ99729 332 aaKnown RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FBXO44Q9H4M3 255 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FBRSL1Q9HCM7 1045 aaKnown RBP11.48□□□□□ -0.57
SSBP4-215ENST00000625926 FAM49BQ9NUQ9 324 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 RAB20Q9NX57 234 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 SMPD4Q9NXE4 827 aa11.48□□□□□ -0.57
SSBP4-215ENST00000625926 K7ESF4 209 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 COCHO43405 550 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 CILPO75339 1184 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 EGFP01133 1207 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 ZDHHC11BP0C7U3 371 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 HOXA6P31267 233 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 CNR2P34972 360 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 TUBP50607 506 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 LRRC63Q05C16 580 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 STIM1Q13586 685 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 TCERG1LQ5VWI1 586 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 FILIP1Q7Z7B0 1213 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 DCLK2Q8N568 766 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 CCDC26Q8TAB7 109 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 WHAMMQ8TF30 809 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 SEMA4DQ92854 862 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 SECISBP2LQ93073 1101 aaKnown RBP11.47□□□□□ -0.57
SSBP4-215ENST00000625926 DHTKD1Q96HY7 919 aaPredicted RBP11.47□□□□□ -0.57
SSBP4-215ENST00000625926 C2orf42Q9NWW7 574 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 CFAP97Q9P2B7 532 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 TBC1D14Q9P2M4 693 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 NCDNQ9UBB6 729 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 SMG5Q9UPR3 1016 aaKnown RBP11.47□□□□□ -0.57
SSBP4-215ENST00000625926 CACNA1HO95180 2353 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 DOCK6Q96HP0 2047 aa11.47□□□□□ -0.57
SSBP4-215ENST00000625926 ANK1P16157 1881 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 CHURC1-FNTBB4DL54 471 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 PSMA7O14818 248 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 RNF40O75150 1001 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 PPP1R2P41236 205 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 FNTBP49356 437 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 NAIF1Q69YI7 327 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 HEATR6Q6AI08 1181 aaKnown RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 ISM2Q6H9L7 571 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 CLEC20AQ6ZU45 233 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 ZC3H3Q8IXZ2 948 aaKnown RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 KIAA2013Q8IYS2 634 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 GPR161Q8N6U8 529 aaKnown RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 NACA2Q9H009 215 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 FAM124BQ9H5Z6 455 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 CCSER2Q9H7U1 834 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 TLR8Q9NR97 1041 aaKnown RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 GMIPQ9P107 970 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 ARMCX3Q9UH62 379 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-215ENST00000625926 RAB23Q9ULC3 237 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 SLC8A2Q9UPR5 921 aa11.46□□□□□ -0.57
SSBP4-215ENST00000625926 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 E2F8A0AVK6 867 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 HRO43593 1189 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 ACO1P21399 889 aaKnown RBP11.45□□□□□ -0.58
SSBP4-215ENST00000625926 DMWDQ09019 674 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 SIM2Q14190 667 aaPredicted RBP11.45□□□□□ -0.58
SSBP4-215ENST00000625926 DHCR24Q15392 516 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 CBWD6Q4V339 395 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 ZNF394Q53GI3 561 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 CBWD3Q5JTY5 395 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 CBWD5Q5RIA9 395 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 PKN3Q6P5Z2 889 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 JAKMIP2Q96AA8 810 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 OTUB2Q96DC9 234 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 TMEM176AQ96HP8 235 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 DUSP16Q9BY84 665 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 METTL14Q9HCE5 456 aaKnown RBP11.45□□□□□ -0.58
SSBP4-215ENST00000625926 PNPLA8Q9NP80 782 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 CISHQ9NSE2 258 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 GMEB2Q9UKD1 530 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
SSBP4-215ENST00000625926 SCML2Q9UQR0 700 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 COQ4Q9Y3A0 265 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 SH3BP1Q9Y3L3 701 aa11.45□□□□□ -0.58
SSBP4-215ENST00000625926 RIF1Q5UIP0 2472 aaKnown RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 CCDC163A0A0D9SF12 145 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 HHLA1C9JL84 531 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 TLR5O60602 858 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 ADH1CP00326 375 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 CYP17A1P05093 508 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 ATP5C1P36542 298 aaKnown RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 OPRD1P41143 372 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 ID4P47928 161 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 PPP1R26Q5T8A7 1209 aaPredicted RBP11.44□□□□□ -0.58
SSBP4-215ENST00000625926 LAIR1Q6GTX8 287 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 RHBDF2Q6PJF5 856 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 PRR23BQ6ZRT6 265 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 SYT13Q7L8C5 426 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 GPRIN1Q7Z2K8 1008 aa11.44□□□□□ -0.58
SSBP4-215ENST00000625926 WDR5BQ86VZ2 330 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms