RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ANKRD36BP1Q96IX9 119 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 TUBB6Q9BUF5 446 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 ACP6Q9NPH0 428 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 SIX4Q9UIU6 781 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 PCDHB2Q9Y5E7 798 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 CREB1P16220 341 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 MAGEA4P43358 317 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 NOP14P78316 857 aaKnown RBP18.44■□□□□ 0.54
PCF11-207ENST00000624931 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
PCF11-207ENST00000624931 LPIN1Q14693 890 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 WDR44Q5JSH3 913 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 TRAF7Q6Q0C0 670 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 SMG8Q8ND04 991 aaKnown RBP18.44■□□□□ 0.54
PCF11-207ENST00000624931 KIF12Q96FN5 646 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 FAXDC2Q96IV6 333 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 ZMAT2Q96NC0 199 aaKnown RBP18.44■□□□□ 0.54
PCF11-207ENST00000624931 LRRC37BQ96QE4 947 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 ETNK1Q9HBU6 452 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 OGDHLQ9ULD0 1010 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 CORO1CQ9ULV4 474 aaPredicted RBP18.44■□□□□ 0.54
PCF11-207ENST00000624931 STK38LQ9Y2H1 464 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 IPPQ9Y573 584 aa18.44■□□□□ 0.54
PCF11-207ENST00000624931 TRAFD1O14545 582 aaPredicted RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 MGEA5O60502 916 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 ASMTLO95671 621 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 KRT19P08727 400 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 LBX1P52954 281 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 AP3M2P53677 418 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 TMEM132DQ14C87 1099 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 KYAT1Q16773 422 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 SMYD5Q6GMV2 418 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 CGB2Q6NT52 195 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 APBB1IPQ7Z5R6 666 aaPredicted RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 CTU1Q7Z7A3 348 aaKnown RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 TRABD2AQ86V40 505 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 RMDN2Q96LZ7 410 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 PHACTR1Q9C0D0 580 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 FETUBQ9UGM5 382 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 SLC24A2Q9UI40 661 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 SCINQ9Y6U3 715 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 MEIS3P2A8K0S8 358 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 ITGB3P05106 788 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 CKBP12277 381 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 NSFP46459 744 aaKnown RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 MBTPS1Q14703 1052 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 PDK4Q16654 411 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 ZC3H12AQ5D1E8 599 aaKnown RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 ANKRD20A2Q5SQ80 823 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 ANKRD20A1Q5TYW2 823 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 ANKRD20A3Q5VUR7 823 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 CYP4X1Q8N118 509 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 CXorf38Q8TB03 319 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 DENND1AQ8TEH3 1009 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 C18orf25Q96B23 403 aaPredicted RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 ASB7Q9H672 318 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 CHORDC1Q9UHD1 332 aaPredicted RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 LRRC42Q9Y546 428 aa18.43■□□□□ 0.54
PCF11-207ENST00000624931 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
PCF11-207ENST00000624931 PPP1R12AO14974 1030 aaPredicted RBP18.42■□□□□ 0.54
PCF11-207ENST00000624931 ASS1P00966 412 aaKnown RBP18.42■□□□□ 0.54
PCF11-207ENST00000624931 CYP1A1P04798 512 aaPredicted RBP18.42■□□□□ 0.54
PCF11-207ENST00000624931 KLRC2P26717 231 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 MNX1P50219 401 aaPredicted RBP18.42■□□□□ 0.54
PCF11-207ENST00000624931 SF3A3Q12874 501 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCF11-207ENST00000624931 TRPC3Q13507 836 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 BLMHQ13867 455 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 FAM26DQ5JW98 314 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 RCOR2Q8IZ40 523 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 KIF2BQ8N4N8 673 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 RBM41Q96IZ5 413 aaKnown RBP18.42■□□□□ 0.54
PCF11-207ENST00000624931 ZNF570Q96NI8 536 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 SMC6Q96SB8 1091 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 RBM15Q96T37 977 aaKnown RBP eCLIP18.42■□□□□ 0.547e-17■■■■■ 41.5
PCF11-207ENST00000624931 OSBPL8Q9BZF1 889 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 XYLT2Q9H1B5 865 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 RNPEPL1Q9HAU8 725 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 SAR1AQ9NR31 198 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 TUBGCP4Q9UGJ1 667 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 GGT7Q9UJ14 662 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 PHTF1Q9UMS5 762 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 POLIQ9UNA4 740 aa18.42■□□□□ 0.54
PCF11-207ENST00000624931 DRG1Q9Y295 367 aaKnown RBP18.42■□□□□ 0.54
PCF11-207ENST00000624931 EXOC1LA0A1B0GW35 172 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 NEBLO76041 1014 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 RALAP11233 206 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 KRT5P13647 590 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 CALB2P22676 271 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
PCF11-207ENST00000624931 FOXN2P32314 431 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 CDK7P50613 346 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 ATN1P54259 1190 aaPredicted RBP18.41■□□□□ 0.54
PCF11-207ENST00000624931 MGAT5Q09328 741 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 CUL2Q13617 745 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 ZNF699Q32M78 642 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 ERICH1Q86X53 443 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 FAM126BQ8IXS8 530 aa18.41■□□□□ 0.54
PCF11-207ENST00000624931 ENDOVQ8N8Q3 282 aaKnown RBP18.41■□□□□ 0.54
PCF11-207ENST00000624931 LRRC8CQ8TDW0 803 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms