RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 TATDN2Q93075 761 aa22.37■■□□□ 1.17
PMPCA-212ENST00000622209 PCED1BQ96HM7 432 aa22.37■■□□□ 1.17
PMPCA-212ENST00000622209 PARD6AQ9NPB6 346 aa22.37■■□□□ 1.17
PMPCA-212ENST00000622209 OTOL1A6NHN0 477 aaPredicted RBP22.36■■□□□ 1.17
PMPCA-212ENST00000622209 NOL4O94818 638 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 ARSAP15289 507 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 TGM1P22735 817 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 TYRO3Q06418 890 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 SPEM2Q0P670 501 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 SKOR2Q2VWA4 1001 aaPredicted RBP22.36■■□□□ 1.17
PMPCA-212ENST00000622209 EHBP1Q8NDI1 1231 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 LMO3Q8TAP4 145 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 CEP295NLQ96MC4 621 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 CYP2S1Q96SQ9 504 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 UXTQ9UBK9 157 aaPredicted RBP22.36■■□□□ 1.17
PMPCA-212ENST00000622209 NFE2L3Q9Y4A8 694 aa22.36■■□□□ 1.17
PMPCA-212ENST00000622209 CILPO75339 1184 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 TADA3O75528 432 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 PAPSS2O95340 614 aaPredicted RBP22.35■■□□□ 1.17
PMPCA-212ENST00000622209 TBXAS1P24557 533 aaPredicted RBP22.35■■□□□ 1.17
PMPCA-212ENST00000622209 CUL2Q13617 745 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 LAIR1Q6GTX8 287 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 ACOT1Q86TX2 421 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 LONP2Q86WA8 852 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 SYNPOQ8N3V7 929 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 NT5C1BQ96P26 610 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 NT5C1AQ9BXI3 368 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 B3GNT5Q9BYG0 378 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 ELOVL4Q9GZR5 314 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 KIF9Q9HAQ2 790 aa22.35■■□□□ 1.17
PMPCA-212ENST00000622209 ATP8B3O60423 1300 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 SOBPA7XYQ1 873 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 PRKCSHP14314 528 aaPredicted RBP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 CD58P19256 250 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 BDNFP23560 247 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 YWHAEP62258 255 aaKnown RBP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 LMNB2Q03252 620 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 GRSF1Q12849 480 aaKnown RBP eCLIP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 MAN2A1Q16706 1144 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 FSTL4Q6MZW2 842 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 PKN3Q6P5Z2 889 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 C11orf57Q6ZUT1 292 aaPredicted RBP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 TRMT2BQ96GJ1 504 aaKnown RBP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 SPATA17Q96L03 361 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 MYRFLQ96LU7 910 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 SLC22A12Q96S37 553 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 NAT10Q9H0A0 1025 aaKnown RBP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 CISHQ9NSE2 258 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 SAMSN1Q9NSI8 373 aaKnown RBP22.34■■□□□ 1.17
PMPCA-212ENST00000622209 HMGXB4Q9UGU5 601 aa22.34■■□□□ 1.17
PMPCA-212ENST00000622209 KCNJ18B7U540 433 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 EEF1GP26641 437 aaKnown RBP22.33■■□□□ 1.17
PMPCA-212ENST00000622209 GRIK1P39086 918 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 ATXN1P54253 815 aaKnown RBP22.33■■□□□ 1.17
PMPCA-212ENST00000622209 LRMPQ12912 555 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 KCNJ12Q14500 433 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 ZNF268Q14587 947 aaPredicted RBP22.33■■□□□ 1.17
PMPCA-212ENST00000622209 TMEM196Q5HYL7 178 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 WHAMMQ8TF30 809 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 CHFRQ96EP1 664 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 TUBGCP2Q9BSJ2 902 aa22.33■■□□□ 1.17
PMPCA-212ENST00000622209 FBRSL1Q9HCM7 1045 aaKnown RBP22.33■■□□□ 1.17
PMPCA-212ENST00000622209 TRAV19A0A0A6YYK7 116 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 GTPBP10A4D1E9 387 aaKnown RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 PRR5-ARHGAP8B1AHC4 643 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 TRDMT1O14717 391 aaKnown RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 TRIM66O15016 1216 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 CKMP06732 381 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 RETP07949 1114 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 USP17L7P0C7H9 530 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 CNR2P34972 360 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 PXNP49023 591 aaPredicted RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 GALK1P51570 392 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 ARHGAP8P85298 464 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 MYL5Q02045 173 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 PDGFRLQ15198 375 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 TCP11X2Q5H9J9 407 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 NAIF1Q69YI7 327 aaPredicted RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 CEP68Q76N32 757 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 ARL14EPQ8N8R7 260 aaPredicted RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 C8orf48Q96LL4 319 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 TWNKQ96RR1 684 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 ARID3AQ99856 593 aa22.32■■□□□ 1.16
PMPCA-212ENST00000622209 INTS2Q9H0H0 1204 aaKnown RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 DUS2Q9NX74 493 aaKnown RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 CDV3Q9UKY7 258 aaKnown RBP22.32■■□□□ 1.16
PMPCA-212ENST00000622209 C2orf78A6NCI8 922 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 EGFP01133 1207 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 SDHBP21912 280 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 ANXA13P27216 316 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 AMPD2Q01433 879 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 ORC1Q13415 861 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 MTF1Q14872 753 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 VWA3BQ502W6 1294 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 HSP90AA4PQ58FG1 418 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 CDKAL1Q5VV42 579 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 GBP6Q6ZN66 633 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.31■■□□□ 1.16
PMPCA-212ENST00000622209 PPM1KQ8N3J5 372 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 MED10Q9BTT4 135 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms