RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ATL2Q8NHH9 583 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 DACT3Q96B18 629 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SLITRK1Q96PX8 696 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SYT17Q9BSW7 474 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SMYD3Q9H7B4 428 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 A1CFQ9NQ94 594 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 PRMT7Q9NVM4 692 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 PIH1D1Q9NWS0 290 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 UBP1Q9NZI7 540 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 WHRNQ9P202 907 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 TTLL13PA6NNM8 815 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 DIAPH2O60879 1101 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 MAPTP10636 758 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 FKBP1AP62942 108 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 CAPRIN1Q14444 709 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SIX1Q15475 284 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 B3GNT9Q6UX72 402 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 PIGWQ7Z7B1 504 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 RSPH1Q8WYR4 309 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 TRAIPQ9BWF2 469 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 YY1AP1Q9H869 796 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 COG4Q9H9E3 785 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SNTG2Q9NY99 539 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 VWA5AO00534 786 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 FSCN2O14926 492 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CST8O60676 142 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SNX2O60749 519 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 DNAJC8O75937 253 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 KRT7P08729 469 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 KCNJ2P63252 427 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CYP24A1Q07973 514 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CYP1B1Q16678 543 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SGSM1Q2NKQ1 1148 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 DEFB115Q30KQ5 88 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SGO1Q5FBB7 561 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SPATA21Q7Z572 469 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM83AQ86UY5 434 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 C12orf56Q8IXR9 622 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 MCOLN2Q8IZK6 566 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ARHGAP24Q8N264 748 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SNX19Q92543 992 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SERPINB12Q96P63 405 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 EPAS1Q99814 870 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 HERPUD2Q9BSE4 406 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 VPS33BQ9H267 617 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CYP4F11Q9HBI6 524 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 L3MBTL1Q9Y468 752 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 KIF13BQ9NQT8 1826 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 A8MX80 341 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 NT5C1B-RDH14C9J2C7 533 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 KRT37O76014 449 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ATP6V1G2O95670 118 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CCNE2O96020 404 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 MYL4P12829 197 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 MYL6P60660 151 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 PLIN5Q00G26 463 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 TAF1BQ53T94 588 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 KIRREL3Q8IZU9 778 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 DCLK3Q9C098 648 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 NMRK2Q9NPI5 230 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 KRT82Q9NSB4 513 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 GREB1LQ9C091 1923 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 SCN9AQ15858 1988 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 TBKBP1A7MCY6 615 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 M0QYT0 321 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 IGF2BP3O00425 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 MTA2O94776 668 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 RBP3P10745 1247 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CLNS1AP54105 237 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ROR1Q01973 937 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 EFEMP1Q12805 493 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 BTG3Q14201 252 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 GOLGA7BQ2TAP0 167 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 P3H1Q32P28 736 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ACBD5Q5T8D3 534 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 PCNX4Q63HM2 1172 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 TTC23LQ6PF05 361 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ANO5Q75V66 913 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 BZW1Q7L1Q6 419 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 C4orf19Q8IY42 314 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 RBM15Q96T37 977 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 OSBPL8Q9BZF1 889 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 PARVAQ9NVD7 372 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 NINJ2Q9NZG7 142 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 ZFATQ9P243 1243 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 UBR3Q6ZT12 1888 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 OPHN1O60890 802 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 LRG1P02750 347 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 PCSK1P29120 753 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 NCKAP1LP55160 1127 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 PGM5Q15124 567 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 MUM1Q2TAK8 710 aa8.6□□□□□ -1.03
PTPDC1-204ENST00000620992 C11orf96Q7Z7L8 435 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms