RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZZEF1O43149 2961 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZBTB24O43167 697 aaPredicted RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 NDUFS2O75306 463 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 STAU1O95793 577 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZDHHC11BP0C7U3 371 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 HOXB2P14652 356 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 WARSP23381 471 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 PCSK1P29120 753 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CTSKP43235 329 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ACADVLP49748 655 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 SMTNP53814 917 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CYP4F3Q08477 520 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 KCNB1Q14721 858 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 GRAMD4Q6IC98 578 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 SLFN12LQ6IEE8 588 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 RHBDF2Q6PJF5 856 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 FILIP1Q7Z7B0 1213 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 LSMEM2Q8N112 164 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 C4orf32Q8N8J7 132 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CXorf38Q8TB03 319 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 IPO4Q8TEX9 1081 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 ARHGEF4Q9NR80 690 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 POLR3BQ9NW08 1133 aaPredicted RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.91□□□□□ -1.62
SNCA-213ENST00000618500 WDR35Q9P2L0 1181 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ITGA11Q9UKX5 1188 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 CDH9Q9ULB4 789 aa4.91□□□□□ -1.62
SNCA-213ENST00000618500 ZNF840PA6NDX5 716 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 ENC1O14682 589 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 BCAT2O15382 392 aaPredicted RBP4.9□□□□□ -1.62
SNCA-213ENST00000618500 ATXN1LP0C7T5 689 aaKnown RBP4.9□□□□□ -1.62
SNCA-213ENST00000618500 SFTPCP11686 197 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 ACP1P24666 158 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 NUDT1P36639 197 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 AFF3P51826 1226 aaKnown RBP4.9□□□□□ -1.62
SNCA-213ENST00000618500 SEC13P55735 322 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 HLA-BQ31612 363 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 CDCP2Q5VXM1 449 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 JADE1Q6IE81 842 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 SDE2Q6IQ49 451 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 RINT1Q6NUQ1 792 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 HTR3DQ70Z44 454 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 C12orf40Q86WS4 652 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 GIPC2Q8TF65 315 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 FGF11Q92914 225 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 TCEANC2Q96MN5 208 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 HS3ST6Q96QI5 342 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 KIFC3Q9BVG8 833 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 NUP58Q9BVL2 599 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 RAB34Q9BZG1 259 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 FOXP1Q9H334 677 aaPredicted RBP4.9□□□□□ -1.62
SNCA-213ENST00000618500 NCOA5Q9HCD5 579 aaKnown RBP4.9□□□□□ -1.62
SNCA-213ENST00000618500 TRPM5Q9NZQ8 1165 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 FTSJ1Q9UET6 329 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 KCNJ14Q9UNX9 436 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 FRYQ5TBA9 3013 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 ATRXP46100 2492 aa4.9□□□□□ -1.62
SNCA-213ENST00000618500 A0A1B0GTQ1 180 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 KPNA7A9QM74 516 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 KIAA0391O15091 583 aaKnown RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 VILLO15195 856 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 PRPF40AO75400 957 aaKnown RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 SOAT2O75908 522 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 RTN3O95197 1032 aaPredicted RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 CISD3P0C7P0 127 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 NCAM1P13591 858 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 TXKP42681 527 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 PEX3P56589 373 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 PCBP4P57723 403 aaKnown RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 EIF4HQ15056 248 aaKnown RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 ANKRD1Q15327 319 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 KLHDC10Q6PID8 442 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 ZNF574Q6ZN55 896 aaPredicted RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 ZNF513Q8N8E2 541 aaPredicted RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 SYT2Q8N9I0 419 aaPredicted RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 ZNF248Q8NDW4 579 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 HMGB4Q8WW32 186 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 MRGPRX1Q96LB2 322 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 GAREM1Q9H706 876 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.9□□□□□ -1.632e-6■■■■■ 149.1
SNCA-213ENST00000618500 TMLHEQ9NVH6 421 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 SCML1Q9UN30 329 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 FNDC3AQ9Y2H6 1198 aaKnown RBP4.9□□□□□ -1.63
SNCA-213ENST00000618500 ZNF510Q9Y2H8 683 aa4.9□□□□□ -1.63
SNCA-213ENST00000618500 MEI4A8MW99 385 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 PRB1P04280 392 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CKMP06732 381 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ACO1P21399 889 aaKnown RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 RXRGP48443 463 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 GTF2BQ00403 316 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 E2F1Q01094 437 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TMEM119Q4V9L6 283 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 C2orf27AQ580R0 203 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 SPACA3Q8IXA5 215 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 PDCL2Q8N4E4 241 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 HNRNPABQ99729 332 aaKnown RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 SLC2A11Q9BYW1 496 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms