RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 WSCD1Q658N2 575 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 SH2D3CQ8N5H7 860 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 SCG3Q8WXD2 468 aaKnown RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 ATP6V1E2Q96A05 226 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 TBCBQ99426 244 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 SENP1Q9P0U3 644 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ABCA3Q99758 1704 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 H2AFXP16104 143 aaPredicted RBP14.43□□□□□ -0.1
CIITA-213ENST00000618327 FAM47EQ6ZV65 393 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 ACTL9Q8TC94 416 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 ELAC2Q9BQ52 826 aaKnown RBP14.43□□□□□ -0.1
CIITA-213ENST00000618327 MRPL9Q9BYD2 267 aaKnown RBP14.43□□□□□ -0.1
CIITA-213ENST00000618327 MYH7P12883 1935 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 RAD51Q06609 339 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 BIRC2Q13490 618 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 SLC29A2Q14542 456 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 ZBTB41Q5SVQ8 909 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 REXO2Q9Y3B8 237 aaKnown RBP14.43□□□□□ -0.1
CIITA-213ENST00000618327 BTNL10A8MVZ5 291 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 CYP1A2P05177 515 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 GLI1P08151 1106 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 CRHR2Q13324 411 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 C3orf62Q6ZUJ4 267 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
CIITA-213ENST00000618327 CXorf38Q8TB03 319 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 LPPQ93052 612 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 DMAP1Q9NPF5 467 aaPredicted RBP14.43□□□□□ -0.1
CIITA-213ENST00000618327 PCDHB5Q9Y5E4 795 aa14.43□□□□□ -0.1
CIITA-213ENST00000618327 ARIH2O95376 493 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 TYK2P29597 1187 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 MAMLD1Q13495 774 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 ITGA7Q13683 1181 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 LRRC52Q8N7C0 313 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 LRRN4CLQ8ND94 238 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 PPP2R3CQ969Q6 453 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 TMEM121Q9BTD3 319 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 SLC13A1Q9BZW2 595 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 FAM105AQ9NUU6 356 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 MYH1P12882 1939 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 CHUKO15111 745 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 MYLK4Q86YV6 388 aaPredicted RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 LRRC43Q8N309 656 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 EDEM1Q92611 657 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 RPRD1AQ96P16 312 aaPredicted RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 FRMD8Q9BZ67 464 aaPredicted RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 ELOVL4Q9GZR5 314 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 ANKZF1Q9H8Y5 726 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 F8VP50 259 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 SPAG7O75391 227 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 LRG1P02750 347 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 C4BPAP04003 597 aaKnown RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 HSD17B3P37058 310 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 MBTD1Q05BQ5 628 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 RCN2Q14257 317 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 LRRC14Q15048 493 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 FAM133BQ5BKY9 247 aaKnown RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 PPHLN1Q8NEY8 458 aaKnown RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 FBXO25Q8TCJ0 367 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 ADAM33Q9BZ11 813 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 TRABDQ9H4I3 376 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 SH3BP1Q9Y3L3 701 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 IPPQ9Y573 584 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 CHD4Q14839 1912 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 SPAG6O75602 509 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 NOMO3P69849 1222 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 ARHGAP1Q07960 439 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 TSTA3Q13630 321 aaPredicted RBP14.42□□□□□ -0.1
CIITA-213ENST00000618327 ACAP1Q15027 740 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 ERMARDQ5T6L9 678 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 FAXCQ5TGI0 409 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 PDZD8Q8NEN9 1154 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 MUC3BQ9H195 1237 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 CHST12Q9NRB3 414 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 WHRNQ9P202 907 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 NCANO14594 1321 aa14.42□□□□□ -0.1
CIITA-213ENST00000618327 SEPT4O43236 478 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 C22orf31O95567 290 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 ASGR1P07306 291 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 MAP3K10Q02779 954 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 EFEMP1Q12805 493 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 LRRC23Q53EV4 343 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 MFSD7Q6UXD7 560 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 DEFB106AQ8N104 65 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 CD99L2Q8TCZ2 262 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PDZD7Q9H5P4 517 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 NAV1Q8NEY1 1877 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 GMNCA6NCL1 334 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 DNAJC8O75937 253 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 TAC1P20366 129 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 MIPP30301 263 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 SLC11A2P49281 568 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 ESRRGP62508 458 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PHF13Q86YI8 300 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 CRLF3Q8IUI8 442 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PPP1R2P1Q96PQ5 205 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms