RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CDO1Q16878 200 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 TWF2Q6IBS0 349 aaKnown RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 CENPUQ71F23 418 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 SCUBE3Q8IX30 993 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 TRPV1Q8NER1 839 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 FAM172AQ8WUF8 416 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 TNIP3Q96KP6 325 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 PPP1R10Q96QC0 940 aaKnown RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 C11orf84Q9BUA3 381 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 EURLQ9NYK6 297 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 M0QZ92 97 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 RBP3P10745 1247 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 CYBAP13498 195 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 CCDC130P13994 396 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 TGM2P21980 687 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 LMO2P25791 158 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 RPL22P35268 128 aaKnown RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 PSMC4P43686 418 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 LILRA4P59901 499 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 ATP11AP98196 1134 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 SREBF2Q12772 1141 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 MMRN1Q13201 1228 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 CRHR2Q13324 411 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 ADGRF2Q8IZF7 708 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 SPATA18Q8TC71 538 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 CENPIQ92674 756 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 ARHGEF2Q92974 986 aaKnown RBP16.43■□□□□ 0.22
NR1H3-235ENST00000616973 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 PPCSQ9HAB8 311 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 RNF19AQ9NV58 838 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 GTF2IRD1Q9UHL9 959 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 TRPV2Q9Y5S1 764 aa16.43■□□□□ 0.22
NR1H3-235ENST00000616973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 MYADML2A6NDP7 307 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 PTGESO14684 152 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 HCRTO43612 131 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 PDGFRBP09619 1106 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 IL4RP24394 825 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 CTGFP29279 349 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 CTCFP49711 727 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 KRT81Q14533 505 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 TDRPQ86YL5 185 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 UNC45BQ8IWX7 931 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 NAT8LQ8N9F0 302 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 CPT1BQ92523 772 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 P3H4Q92791 437 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 HNRNPABQ99729 332 aaKnown RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 LPIN3Q9BQK8 851 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 B3GNT5Q9BYG0 378 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 NGRNQ9NPE2 291 aaKnown RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 INTS9Q9NV88 658 aaKnown RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-235ENST00000616973 ACTL7BQ9Y614 415 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
NR1H3-235ENST00000616973 FAM155AB1AL88 458 aaPredicted RBP16.41■□□□□ 0.22
NR1H3-235ENST00000616973 RPLP2P05387 115 aaKnown RBP16.41■□□□□ 0.22
NR1H3-235ENST00000616973 ADORA2BP29275 332 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 HDAC4P56524 1084 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 ROR1Q01973 937 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 ZNF618Q5T7W0 954 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 SLC9A4Q6AI14 798 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 MICALCLQ6ZW33 695 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 RSPH3Q86UC2 560 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 FAF2Q96CS3 445 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 ZNF670Q9BS34 389 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 SNRNP25Q9BV90 132 aaKnown RBP16.41■□□□□ 0.22
NR1H3-235ENST00000616973 GOLGA2P5Q9HBQ8 144 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 PCDH18Q9HCL0 1135 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CHST12Q9NRB3 414 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CDY2AQ9Y6F7 541 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 XPO1O14980 1071 aaKnown RBP16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CORO7P57737 925 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CBLBQ13191 982 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 RASA2Q15283 850 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 HIF1AQ16665 826 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 ANKRD20A8PQ5CZ79 823 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 GNASQ5JWF2 1037 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 MFSD14CQ5VZR4 134 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 SCYL2Q6P3W7 929 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 OSTM1Q86WC4 334 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CHMP6Q96FZ7 201 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 ZNF317Q96PQ6 595 aaPredicted RBP16.41■□□□□ 0.22
NR1H3-235ENST00000616973 NAALADL1Q9UQQ1 740 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 FAM169AQ9Y6X4 670 aa16.41■□□□□ 0.22
NR1H3-235ENST00000616973 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 E7ESA3 106 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 MYO1CO00159 1063 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 ARL4CP56559 192 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 NR1H3Q13133 447 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 NBPF20Q3BBV1 942 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 EFHC1Q5JVL4 640 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 DARS2Q6PI48 645 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms