RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ZNF500O60304 480 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 TBC1D4O60343 1298 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 CTNND1O60716 968 aaKnown RBP3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 LATS1O95835 1130 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 MYL1P05976 194 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 FESP07332 822 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 CSF1RP07333 972 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 PDHA1P08559 390 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 BDNFP23560 247 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 CYP2C18P33260 490 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 COPB2P35606 906 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 DGKEP52429 567 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 CACNB3P54284 484 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 POU5F1Q01860 360 aaKnown RBP3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 TFF2Q03403 129 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 SLC13A2Q13183 592 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 MYBPC2Q14324 1141 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 MINDY4Q4G0A6 757 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 PCID2Q5JVF3 399 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 CERCAMQ5T4B2 595 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 NPNTQ6UXI9 565 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 Q6ZTC4 211 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 OVCH2Q7RTZ1 564 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 KIAA0319LQ8IZA0 1049 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 KRT78Q8N1N4 520 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 SLC15A4Q8N697 577 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 PDILTQ8N807 584 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 ABHD11Q8NFV4 315 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 PPP1R35Q8TAP8 253 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 REPS1Q96D71 796 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 RSPRY1Q96DX4 576 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 LRGUKQ96M69 825 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 PPP1R9BQ96SB3 815 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 P2RX7Q99572 595 aaKnown RBP3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 PAGR1Q9BTK6 254 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 BHMT2Q9H2M3 363 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZHX3Q9H4I2 956 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 CXorf36Q9H7Y0 433 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 FAM204AQ9H8W3 233 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 ANLNQ9NQW6 1124 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 SH3BP4Q9P0V3 963 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 SCINQ9Y6U3 715 aa3.13□□□□□ -1.91
HMGB1P24-202ENST00000615653 IFRD1O00458 451 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 CCP110O43303 1012 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 USP1O94782 785 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 SCGB1D2O95969 90 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 LDHAP00338 332 aaKnown RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 ENGP17813 658 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 KCNA3P22001 575 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 KLRC1P26715 233 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 SLC7A1P30825 629 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 GNALP38405 381 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 PDE1AP54750 535 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 HOXA4Q00056 320 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 CTBP1Q13363 440 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 NFE2Q16621 373 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 INSCQ1MX18 579 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 PLA1AQ53H76 456 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 TMEM63BQ5T3F8 832 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 DENND2CQ68D51 928 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 KIAA1161Q6NSJ0 714 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 CCDC174Q6PII3 467 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 TRIM72Q6ZMU5 477 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 FAM43BQ6ZT52 329 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 Q6ZWC4 215 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 MEPCEQ7L2J0 689 aaKnown RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 CHPFQ8IZ52 775 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 ABRAQ8N0Z2 381 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 MAGEB6Q8N7X4 407 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 IL31RAQ8NI17 732 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 BPIFB1Q8TDL5 484 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 NMD3Q96D46 503 aaKnown RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 R3HDM4Q96D70 268 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 DAZAP1Q96EP5 407 aaKnown RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 MS4A7Q9GZW8 240 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 SMURF2Q9HAU4 748 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 NRIP3Q9NQ35 241 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 TRIM36Q9NQ86 728 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 A1CFQ9NQ94 594 aaKnown RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 XPNPEP3Q9NQH7 507 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 THRAP3Q9Y2W1 955 aaKnown RBP3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 EID1Q9Y6B2 187 aa3.12□□□□□ -1.91
HMGB1P24-202ENST00000615653 UBE2Q2LH0YL09 131 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 TUBB4AP04350 444 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 CHRM5P08912 532 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 KITP10721 976 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 MYCLP12524 364 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 PHKG2P15735 406 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 KELP23276 732 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 PRKAG1P54619 331 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 SUMO2P61956 95 aaKnown RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 POLD3Q15054 466 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 CNN3Q15417 329 aaKnown RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 MAPRE1Q15691 268 aaKnown RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 MAP9Q49MG5 647 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 CERKLQ49MI3 558 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 DEPDC1Q5TB30 811 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 PRAMEF17Q5VTA0 474 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 MORN5Q5VZ52 161 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms