RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 F8VP50 259 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TOMM70O94826 608 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FOXN2P32314 431 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GJA5P36382 358 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SCNN1BP51168 640 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 WDR72Q3MJ13 1102 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 VSTM1Q6UX27 236 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ANKMY2Q8IV38 441 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MAB21L3Q8N8X9 362 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 B4GALNT2Q8NHY0 566 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RTP4Q96DX8 246 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TBC1D10AQ9BXI6 508 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SHCBP1LQ9BZQ2 653 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 C10orf88Q9H8K7 445 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PRDM16Q9HAZ2 1276 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TMEM165Q9HC07 324 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC24A2Q9UI40 661 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KAT6AQ92794 2004 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PRPF4O43172 522 aaKnown RBP eCLIP11.33□□□□□ -0.65e-9■■■■□ 20.8
SENP3-EIF4A1-201ENST00000614237 PEX10O60683 326 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 LRCH4O75427 683 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 STK10O94804 968 aaKnown RBP11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KITP10721 976 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CETPP11597 493 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KRT3P12035 628 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 INSRRP14616 1297 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KDELR1P24390 212 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KLC1Q07866 573 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TAF1BQ53T94 588 aaPredicted RBP11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZDHHC17Q8IUH5 632 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DHRS4Q9BTZ2 278 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ARMCX1Q9P291 453 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DNPEPQ9ULA0 475 aa11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 COL4A4P53420 1690 aaPredicted RBP11.33□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 B4GALT5O43286 388 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KRT1P04264 644 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MAGEA4P43358 317 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ZNF143P52747 638 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 FKBP1BP68106 108 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RBP5P82980 135 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TFAMQ00059 246 aaKnown RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DCUN1D2Q6PH85 259 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ALKAL1Q6UXT8 129 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 STMN2Q93045 179 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 UTP4Q969X6 686 aaKnown RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ELOVL4Q9GZR5 314 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 SLC4A7Q9Y6M7 1214 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CAPN9O14815 690 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PECAM1P16284 738 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CD58P19256 250 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 IRX4P78413 519 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 BNIP1Q12981 228 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GRB14Q14449 540 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MARCH8Q5T0T0 291 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 JADE1Q6IE81 842 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PHC3Q8NDX5 983 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CKAP2Q8WWK9 683 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ABTB1Q969K4 478 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MARCOQ9UEW3 520 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NAALADL1Q9UQQ1 740 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 EXOC1LA0A1B0GW35 172 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RRN3P2A6NIE6 340 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TSPAN1O60635 241 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 OPHN1O60890 802 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 LUC7L3O95232 432 aaKnown RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TRUB2O95900 331 aaKnown RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NFICP08651 508 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CXCL8P10145 99 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RFC1P35251 1148 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PRKG1Q13976 671 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 KHDC1Q4VXA5 237 aaKnown RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 XKR4Q5GH76 650 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DSTYKQ6XUX3 929 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DENND2DQ9H6A0 471 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 CORO1CQ9ULV4 474 aaPredicted RBP11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 PHTF1Q9UMS5 762 aa11.32□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 INO80B-WBP1J3KQ70 363 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 APOC4-APOC2K7ER74 178 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 NVLO15381 856 aaKnown RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MICAL2O94851 1124 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GJB6O95452 261 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 APOC2P02655 101 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 TCF4P15884 667 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 GCAP28676 217 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 MAGEA6P43360 314 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 RAB27AP51159 221 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 IQSEC1Q6DN90 963 aa11.31□□□□□ -0.6
SENP3-EIF4A1-201ENST00000614237 LRRC52Q8N7C0 313 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms