RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 TSHRP16473 764 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 MIPP30301 263 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 MAGEA3P43357 314 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 NAMPTP43490 491 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 GCLCP48506 637 aaPredicted RBP7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 ERFP50548 548 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 PAPOLAP51003 745 aaKnown RBP7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 MTMR2Q13614 643 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 SUPT20HL1Q3ZLR7 823 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 FYB2Q5VWT5 728 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 MAVSQ7Z434 540 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 BRSK2Q8IWQ3 736 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 SCYL3Q8IZE3 742 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 ADGRF2Q8IZF7 708 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 FNIP1Q8TF40 1166 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 ATP6V0A1Q93050 837 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 TTC17Q96AE7 1141 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 ZNF518BQ9C0D4 1074 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 ASCC2Q9H1I8 757 aaPredicted RBP7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 RPAP3Q9H6T3 665 aaPredicted RBP7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 PAPOLBQ9NRJ5 636 aaKnown RBP7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.76□□□□□ -1.179e-8■■■■■ 48.4
PPARGC1A-217ENST00000613098 PPM1HQ9ULR3 514 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 H0YIN7 160 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 APOC4-APOC2K7ER74 178 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 AP1G2O75843 785 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 TRUB2O95900 331 aaKnown RBP7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 APOC2P02655 101 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 PSAPP07602 524 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 CSH1P0DML2 217 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 CSH2P0DML3 217 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 PRKCHP24723 683 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 RAP1GAPP47736 663 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 ORC1Q13415 861 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 DCUN1D2Q6PH85 259 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 C7orf26Q96N11 449 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 CYTH2Q99418 400 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 PCMTD2Q9NV79 361 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 SIX4Q9UIU6 781 aa7.76□□□□□ -1.17
PPARGC1A-217ENST00000613098 K7ERI5 159 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MAFGO15525 162 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 USP1O94782 785 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MT-ND3P03897 115 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 KRT3P12035 628 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 CYP3A5P20815 502 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PSMA2P25787 234 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 CCND2P30279 289 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 GRIA2P42262 883 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 CDH8P55286 799 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ACTR3P61158 418 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ZNF200P98182 395 aaPredicted RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 NOMO1Q15155 1222 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MUM1Q2TAK8 710 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 XKR3Q5GH77 459 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MDH1BQ5I0G3 518 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 RABGAP1LQ5R372 815 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 TRMT10BQ6PF06 316 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MTHFD1LQ6UB35 978 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 WDR49Q8IV35 697 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 TMEM192Q8IY95 271 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 THNSL1Q8IYQ7 743 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MPP5Q8N3R9 675 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PQLC3Q8N755 202 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 TMEM35BQ8NCS4 154 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 TUBGCP5Q96RT8 1024 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MMP19Q99542 508 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 NIFKQ9BYG3 293 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 LHX5Q9H2C1 402 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PTPRHQ9HD43 1115 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 RNF146Q9NTX7 359 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 SPATS2LQ9NUQ6 558 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ZNF212Q9UDV6 495 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PCSK1NQ9UHG2 260 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 CPSF3Q9UKF6 684 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 EMCNQ9ULC0 261 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 SDR42E2A6NKP2 422 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PRR5-ARHGAP8B1AHC4 643 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 B2RBV5 119 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ZBTB42B2RXF5 422 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 F8W8V4 182 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 RNASEH1O60930 286 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 TM7SF2O76062 418 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 RBP3P10745 1247 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ANPEPP15144 967 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 CRABP2P29373 138 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 STIP1P31948 543 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PHBP35232 272 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 GABRB2P47870 512 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 CACNA2D1P54289 1103 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 EIF3EP60228 445 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ARHGAP8P85298 464 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PDE1BQ01064 536 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 MSLNQ13421 630 aaPredicted RBP7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 TMEM132BQ14DG7 1078 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 XRRA1Q6P2D8 792 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PALM2Q8IXS6 379 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 LMNTD2Q8IXW0 634 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 PLD5Q8N7P1 536 aa7.75□□□□□ -1.17
PPARGC1A-217ENST00000613098 ZFAND2BQ8WV99 257 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms