RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CCNB1P14635 433 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 IL1R2P27930 398 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 HOXD10P28358 340 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 CCND3P30281 292 aaPredicted RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 ADAM17P78536 824 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 OTUD4Q01804 1114 aaKnown RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 MGAT5Q09328 741 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 PDIA2Q13087 525 aaKnown RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 PKN2Q16513 984 aaKnown RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 KYAT1Q16773 422 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 ASRGL1Q7L266 308 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 TBC1D1Q86TI0 1168 aaPredicted RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 RPAINQ86UA6 219 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 ACAP3Q96P50 834 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 XPNPEP3Q9NQH7 507 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 ARHGEF3Q9NR81 526 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 E7ESA3 106 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 TYROBPO43914 113 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 NPTXRO95502 500 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 IFNB1P01574 187 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 DARSP14868 501 aaKnown RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 KDELR1P24390 212 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 CTCFP49711 727 aaPredicted RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 RAD23BP54727 409 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 ADCY1Q08828 1119 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 ACAP1Q15027 740 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 PDK4Q16654 411 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 FAM47CQ5HY64 1035 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 JADE1Q6IE81 842 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 APBB1IPQ7Z5R6 666 aaPredicted RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 NAT8LQ8N9F0 302 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 GGT7Q9UJ14 662 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 CLUHO75153 1309 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 CST8O60676 142 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 NFICP08651 508 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 KRT15P19012 456 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 PHBP35232 272 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 ARL4CP56559 192 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 GEMIN4P57678 1058 aaKnown RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 GPX6P59796 221 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 PSMC1P62191 440 aaKnown RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 XYLT1Q86Y38 959 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 ATP11CQ8NB49 1132 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 CMASQ8NFW8 434 aaPredicted RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 CPT1BQ92523 772 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 DHRS4Q9BTZ2 278 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 UPF3AQ9H1J1 476 aaKnown RBP15.36■□□□□ 0.05
CDH1-213ENST00000612417 SIX4Q9UIU6 781 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 RABGEF1Q9UJ41 708 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 POLIQ9UNA4 740 aa15.36■□□□□ 0.05
CDH1-213ENST00000612417 GOLGA8SH3BPF8 625 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 SPAG7O75391 227 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 CD19P15391 556 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 TSHRP16473 764 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 HOXA11P31270 313 aaPredicted RBP15.35■□□□□ 0.05
CDH1-213ENST00000612417 GABRB2P47870 512 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 YARSP54577 528 aaKnown RBP15.35■□□□□ 0.05
CDH1-213ENST00000612417 KCNJ2P63252 427 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 MYO1EQ12965 1108 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 DCAF4L1Q3SXM0 396 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 ZNF667Q5HYK9 610 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 NOTUMQ6P988 496 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 KLHL29Q96CT2 875 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 CPXM1Q96SM3 734 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 TJP2Q9UDY2 1190 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 SRRDQ9UH36 339 aa15.35■□□□□ 0.05
CDH1-213ENST00000612417 APOC4-APOC2K7ER74 178 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 APOC2P02655 101 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 GDF10P55107 478 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 SNX17Q15036 470 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 SMTNL2Q2TAL5 461 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 SLC10A6Q3KNW5 377 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 HP1BP3Q5SSJ5 553 aaPredicted RBP15.34■□□□□ 0.05
CDH1-213ENST00000612417 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 NME8Q8N427 588 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 RAET1EQ8TD07 263 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 MCRS1Q96EZ8 462 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 TRIM6Q9C030 488 aaPredicted RBP15.34■□□□□ 0.05
CDH1-213ENST00000612417 ACSS3Q9H6R3 686 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 VRTNQ9H8Y1 702 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 ZWILCHQ9H900 591 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 KIF9Q9HAQ2 790 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 NXF1Q9UBU9 619 aaKnown RBP15.34■□□□□ 0.05
CDH1-213ENST00000612417 BAIAP2L1Q9UHR4 511 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 SCN10AQ9Y5Y9 1956 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 EDF1O60869 148 aaKnown RBP15.34■□□□□ 0.05
CDH1-213ENST00000612417 UNC5CO95185 931 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 ZWINTO95229 277 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 ERBB2P04626 1255 aa15.34■□□□□ 0.05
CDH1-213ENST00000612417 EZRP15311 586 aaKnown RBP15.34■□□□□ 0.05
CDH1-213ENST00000612417 RPA3P35244 121 aaPredicted RBP15.34■□□□□ 0.05
CDH1-213ENST00000612417 RPL22P35268 128 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms