RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 ALOX15BO15296 676 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 TIMM44O43615 452 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 HNRNPH3P31942 346 aaKnown RBP7.58□□□□□ -1.2
CBWD1-219ENST00000611457 PBX1P40424 430 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 KIF11P52732 1056 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 SPAG1Q07617 926 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ELF2Q15723 593 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ZNF667Q5HYK9 610 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 PLA2G2CQ5R387 149 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 TRIM72Q6ZMU5 477 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 FAM71AQ8IYT1 594 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 PDE11AQ9HCR9 933 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ARHGEF3Q9NR81 526 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ATG13O75143 517 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 CISD3P0C7P0 127 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 CCR3P51677 355 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 BCAT1P54687 386 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 OXCT1P55809 520 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 PAK1Q13153 545 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 EIF4HQ15056 248 aaKnown RBP7.58□□□□□ -1.2
CBWD1-219ENST00000611457 SLC14A2Q15849 920 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 NYAP1Q6ZVC0 841 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 PDZD4Q76G19 769 aaPredicted RBP7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 PSTKQ8IV42 348 aaKnown RBP7.58□□□□□ -1.2
CBWD1-219ENST00000611457 CPA6Q8N4T0 437 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 CSGALNACT2Q8N6G5 542 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ASB12Q8WXK4 309 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 VCPIP1Q96JH7 1222 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 SMOQ99835 787 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 SMOC2Q9H3U7 446 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 THG1LQ9NWX6 298 aaKnown RBP7.58□□□□□ -1.2
CBWD1-219ENST00000611457 ANKFY1Q9P2R3 1169 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 IMPACTQ9P2X3 320 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 INPP5FQ9Y2H2 1132 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 NUMBLQ9Y6R0 609 aa7.58□□□□□ -1.2
CBWD1-219ENST00000611457 TRIOBPQ9H2D6 2365 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 IGLV3-10A0A075B6K4 115 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TRAV19A0A0A6YYK7 116 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 GOLGA6L4A6NEF3 574 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CST3P01034 146 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CD44P16070 742 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CASQ1P31415 396 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 GNL1P36915 607 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 PRKCIP41743 596 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 FOXK2Q01167 660 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 LRMPQ12912 555 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 IQCB1Q15051 598 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CYP4A22Q5TCH4 519 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TMCO3Q6UWJ1 677 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CLEC20AQ6ZU45 233 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 SYT13Q7L8C5 426 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TRMT11Q7Z4G4 463 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZNF683Q8IZ20 524 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TMEM105Q8N8V8 129 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CENPIQ92674 756 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 RSPRY1Q96DX4 576 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 PCED1BQ96HM7 432 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TMEM176AQ96HP8 235 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 GANQ9H2C0 597 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZFP14Q9HCL3 533 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZSCAN32Q9NX65 697 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 PCDHGB2Q9Y5G2 931 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 O00370 1275 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZNF883P0CG24 379 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 KRT13P13646 458 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 NR2F2P24468 414 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 BRD2P25440 801 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ACOT2P49753 483 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TNNC1P63316 161 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 BST2Q10589 180 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 SCAPQ12770 1279 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZNF699Q32M78 642 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZSWIM2Q8NEG5 633 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 USP13Q92995 863 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 TTC17Q96AE7 1141 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 PIWIL1Q96J94 861 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 C1orf74Q96LT6 269 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 PRMT1Q99873 361 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 MRPL45Q9BRJ2 306 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 MIS12Q9H081 205 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 HSD3B7Q9H2F3 369 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 GOLGA2P5Q9HBQ8 144 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 PPARGC1AQ9UBK2 798 aaKnown RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 GOLGA6L19H0YKK7 550 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ATP8B1O43520 1251 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 NRDCO43847 1150 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CYP1A1P04798 512 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ADCY1Q08828 1119 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ICE2Q659A1 982 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 IQCEQ6IPM2 695 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ZNF852Q6ZMS4 543 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 CHST9Q7L1S5 443 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 ITFG1Q8TB96 612 aa7.57□□□□□ -1.2
CBWD1-219ENST00000611457 BPIFB1Q8TDL5 484 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms