RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RPS6KL1Q9Y6S9 549 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TRPM3Q9HCF6 1732 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF263O14978 683 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 HOXA2O43364 376 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FAM153BP0C7A2 387 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 AMPD1P23109 780 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CYP2F1P24903 491 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 NFKBIAP25963 317 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ARFIP2P53365 341 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MAMLD1Q13495 774 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 USP10Q14694 798 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MUM1Q2TAK8 710 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FAM153CQ494X1 144 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 NOL9Q5SY16 702 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TRIM68Q6AZZ1 485 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 HIPK4Q8NE63 616 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 LRRC37BQ96QE4 947 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CCT8L2Q96SF2 557 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 DDX50Q9BQ39 737 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ULBP1Q9BZM6 244 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CYP4F11Q9HBI6 524 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TXLNGQ9NUQ3 528 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FAM153AQ9UHL3 310 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 BCAP29Q9UHQ4 241 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 DNPEPQ9ULA0 475 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 KCNK1O00180 336 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FBXO21O94952 628 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 POLBP06746 335 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 USP17L7P0C7H9 530 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ZBTB48P10074 688 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 RARGP13631 454 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SMPD1P17405 629 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SLC6A3Q01959 620 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SP2Q02086 613 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CNGA2Q16280 664 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FRA10AC1Q70Z53 315 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 PALB2Q86YC2 1186 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FBXO36Q8NEA4 188 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 C18orf25Q96B23 403 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 STAMBPL1Q96FJ0 436 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TMEM39AQ9NV64 488 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 NDFIP2Q9NV92 336 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 KANSL3Q9P2N6 904 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 AFF4Q9UHB7 1163 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 DUOX1Q9NRD9 1551 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FAM47DPA6NHR8 397 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 GPR25O00155 361 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 OPLAHO14841 1288 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 DHX15O43143 795 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SNX2O60749 519 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 LRG1P02750 347 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 PTPN1P18031 435 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 LSP1P33241 339 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ARL2P36404 184 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SLC39A12Q504Y0 691 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ERMARDQ5T6L9 678 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 LRRC6Q86X45 466 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 LMNTD2Q8IXW0 634 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ATP6V0D2Q8N8Y2 350 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 PPP1R36Q96LQ0 422 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 DCLK3Q9C098 648 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 VCX3BQ9H321 246 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 PIH1D1Q9NWS0 290 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 FARP1Q9Y4F1 1045 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 UMODL1Q5DID0 1318 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 TMEM88BA6NKF7 163 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 TRIM49D1C9J1S8 452 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 MTSS1O43312 755 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 DCTN3O75935 186 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 URODP06132 367 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SLC2A3P11169 496 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 RPL21P46778 160 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 IRAK1P51617 712 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 VCPP55072 806 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 NOMO3P69849 1222 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ART3Q13508 389 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 BTG3Q14201 252 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 DBN1Q16643 649 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 TFAP2DQ7Z6R9 452 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 PIGZQ86VD9 579 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 XPO6Q96QU8 1125 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 PCDHB18PQ96TA0 734 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ROPN1BQ9BZX4 212 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ROPN1Q9HAT0 212 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SMPD4Q9NXE4 827 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 HACD3Q9P035 362 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 CAND2O75155 1236 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 ARIH2O95376 493 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 CHEK2O96017 543 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SNRPAP09012 282 aaKnown RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 SLC11A2P49281 568 aa7.55□□□□□ -1.2
CSDE1-218ENST00000610726 CRYBB1P53674 252 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-218ENST00000610726 RPL10AP62906 217 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms