RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 INHBEP58166 350 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 NOMO1Q15155 1222 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 TAF2Q6P1X5 1199 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 SCYL2Q6P3W7 929 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 TBCBQ99426 244 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 KPNA6O60684 536 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 DUSP11O75319 330 aaKnown RBP29.3■■■□□ 2.28
CSPG5-205ENST00000610462 ZNF618Q5T7W0 954 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 TWF2Q6IBS0 349 aaKnown RBP29.3■■■□□ 2.28
CSPG5-205ENST00000610462 MICALCLQ6ZW33 695 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 RIBC1Q8N443 379 aaPredicted RBP29.3■■■□□ 2.28
CSPG5-205ENST00000610462 CPT1BQ92523 772 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 CHMP6Q96FZ7 201 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 PHACTR1Q9C0D0 580 aa29.3■■■□□ 2.28
CSPG5-205ENST00000610462 ATXN2Q99700 1313 aaKnown RBP29.29■■■□□ 2.28
CSPG5-205ENST00000610462 SCNN1AP37088 669 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 P3H4Q92791 437 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 CCDC134Q9H6E4 229 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 NAALADL1Q9UQQ1 740 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 DYNC1LI1Q9Y6G9 523 aaKnown RBP29.29■■■□□ 2.28
CSPG5-205ENST00000610462 MYADML2A6NDP7 307 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 HUS1O60921 280 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 FASTKD3Q14CZ7 662 aaKnown RBP29.29■■■□□ 2.28
CSPG5-205ENST00000610462 QPCTQ16769 361 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 CHADLQ6NUI6 762 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 NPNTQ6UXI9 565 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 SAPCD2Q86UD0 394 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 VSIG1Q86XK7 387 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 NAT8LQ8N9F0 302 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 EURLQ9NYK6 297 aa29.29■■■□□ 2.28
CSPG5-205ENST00000610462 C6orf222P0C671 652 aaPredicted RBP29.28■■■□□ 2.28
CSPG5-205ENST00000610462 DRD4P21917 467 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 PTPN9P43378 593 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 ROR1Q01973 937 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 SLC26A9Q7LBE3 791 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 ARCQ7LC44 396 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 ADGRF2Q8IZF7 708 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 FAM71DQ8N9W8 422 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 TRPV1Q8NER1 839 aa29.28■■■□□ 2.28
CSPG5-205ENST00000610462 TRAF3IP1Q8TDR0 691 aaPredicted RBP29.28■■■□□ 2.28
CSPG5-205ENST00000610462 MDM4O15151 490 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 SLC10A3P09131 477 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 IL4RP24394 825 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 LRPAP1P30533 357 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 STIP1P31948 543 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 ACADSBP45954 432 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 LILRA4P59901 499 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 MRPS6P82932 125 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 PDIA2Q13087 525 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 HIF1AQ16665 826 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 ZC3H12AQ5D1E8 599 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 ZBED8Q8IZ13 594 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 CYP4X1Q8N118 509 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 TOP6BLQ8N6T0 577 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 ZNF317Q96PQ6 595 aaPredicted RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 SNRNP25Q9BV90 132 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 PCDH18Q9HCL0 1135 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 GPATCH2LQ9NWQ4 482 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 ANKRD65E5RJM6 399 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 SMAPO00193 183 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 TRIM66O15016 1216 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 WARSP23381 471 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 HDAC4P56524 1084 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 ANKRD22Q5VYY1 191 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 DARS2Q6PI48 645 aaKnown RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 VSTM1Q6UX27 236 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 C10orf67Q8IYJ2 551 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 TNIP3Q96KP6 325 aa29.27■■■□□ 2.28
CSPG5-205ENST00000610462 MTG1Q9BT17 334 aaPredicted RBP29.27■■■□□ 2.28
CSPG5-205ENST00000610462 CPLX4Q7Z7G2 160 aa29.26■■■□□ 2.27
CSPG5-205ENST00000610462 SLC2A14Q8TDB8 520 aa29.26■■■□□ 2.27
CSPG5-205ENST00000610462 CLEC4CQ8WTT0 213 aa29.26■■■□□ 2.27
CSPG5-205ENST00000610462 HSFY1Q96LI6 401 aa29.26■■■□□ 2.27
CSPG5-205ENST00000610462 PRMT1Q99873 361 aaKnown RBP29.26■■■□□ 2.27
CSPG5-205ENST00000610462 C11orf84Q9BUA3 381 aaPredicted RBP29.26■■■□□ 2.27
CSPG5-205ENST00000610462 DDX20Q9UHI6 824 aaKnown RBP29.26■■■□□ 2.27
CSPG5-205ENST00000610462 SCN10AQ9Y5Y9 1956 aa29.26■■■□□ 2.27
CSPG5-205ENST00000610462 EXOC1LA0A1B0GW35 172 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 M0QZ92 97 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 PTGESO14684 152 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 CAPN15O75808 1086 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 CREB1P16220 341 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 CTGFP29279 349 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 ARL4CP56559 192 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 CRHR2Q13324 411 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 ANKRD20A8PQ5CZ79 823 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 HP1BP3Q5SSJ5 553 aaPredicted RBP29.25■■■□□ 2.27
CSPG5-205ENST00000610462 OSTM1Q86WC4 334 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 PPP1R10Q96QC0 940 aaKnown RBP29.25■■■□□ 2.27
CSPG5-205ENST00000610462 TBK1Q9UHD2 729 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 TRPV2Q9Y5S1 764 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 CDY2AQ9Y6F7 541 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 TMEM120BA0PK00 339 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 GOLGA8MH3BSY2 632 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 LCP1P13796 627 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 TGM2P21980 687 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 GJA9P57773 515 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 TDRPQ86YL5 185 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 PLD5Q8N7P1 536 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 CENPIQ92674 756 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms