RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 INTS9Q9NV88 658 aaKnown RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 FETUBQ9UGM5 382 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 CD48P09326 243 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 RBP3P10745 1247 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ZFXP17010 805 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 RGS7P49802 495 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 SEC24CP53992 1094 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ARL4CP56559 192 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 CORO7P57737 925 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 LILRA4P59901 499 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 HIF1AQ16665 826 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 EFHC1Q5JVL4 640 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 MFSD14CQ5VZR4 134 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 EXOC3L1Q86VI1 746 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 SMG8Q8ND04 991 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 FAM172AQ8WUF8 416 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 CENPIQ92674 756 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 KHSRPQ92945 711 aaKnown RBP eCLIP12.48□□□□□ -0.412e-7■■□□□ 14.2
USP6NL-206ENST00000609853 LENG1Q96BZ8 264 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 PEBP4Q96S96 227 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 UBN1Q9NPG3 1134 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 TRPV2Q9Y5S1 764 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ETS1P14921 441 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 PHBP35232 272 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ROR1Q01973 937 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 UBAP2Q5T6F2 1119 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 PPP1R21Q6ZMI0 780 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 FAM228AQ86W67 206 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 PSTKQ8IV42 348 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ADGRF2Q8IZF7 708 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 ATXN2LQ8WWM7 1075 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 PPP1R10Q96QC0 940 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 HNRNPABQ99729 332 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 C11orf84Q9BUA3 381 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 UPF3AQ9H1J1 476 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 NGRNQ9NPE2 291 aaKnown RBP12.48□□□□□ -0.41
USP6NL-206ENST00000609853 KLK14Q9P0G3 267 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 SENP1Q9P0U3 644 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 SLC24A2Q9UI40 661 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 NME7Q9Y5B8 376 aa12.48□□□□□ -0.41
USP6NL-206ENST00000609853 E7ESA3 106 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 TULP2O00295 520 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 APOL1O14791 398 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 SPTLC1O15269 473 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 KIAA0754O94854 1291 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 C6orf222P0C671 652 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 FGFR1P11362 822 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 RPL22P35268 128 aaKnown RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 GNASQ5JWF2 1037 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 GKAP1Q5VSY0 366 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 SLC9A4Q6AI14 798 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 DARS2Q6PI48 645 aaKnown RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 STRADAQ7RTN6 431 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 CPLX4Q7Z7G2 160 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 PDIK1LQ8N165 341 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 NAT8LQ8N9F0 302 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 MDM1Q8TC05 714 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 RTP4Q96DX8 246 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 DPEP3Q9H4B8 488 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 DNAJC17Q9NVM6 304 aaKnown RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 EURLQ9NYK6 297 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 SAE1Q9UBE0 346 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-206ENST00000609853 GTF2IRD1Q9UHL9 959 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 NAALADL1Q9UQQ1 740 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
USP6NL-206ENST00000609853 EXOC1LA0A1B0GW35 172 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 MYO1CO00159 1063 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 GRAP2O75791 330 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PDGFRBP09619 1106 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PAX3P23760 479 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 NR2C2P49116 596 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 SLC18A1P54219 525 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 FCGRTP55899 365 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 BCAR1P56945 870 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 ATP11AP98196 1134 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 XRCC4Q13426 336 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 TAF5Q15542 800 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 DPYSL2Q16555 572 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 CDO1Q16878 200 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 ANKRD20A8PQ5CZ79 823 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 CYP4F22Q6NT55 531 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 SCYL2Q6P3W7 929 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 TMEM86AQ8N2M4 240 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms