RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 CD48P09326 243 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 ACAT1P24752 427 aaKnown RBP11.97□□□□□ -0.49
LINC01278-204ENST00000609143 AFF1P51825 1210 aaKnown RBP11.97□□□□□ -0.49
LINC01278-204ENST00000609143 OTUD4Q01804 1114 aaKnown RBP11.97□□□□□ -0.49
LINC01278-204ENST00000609143 TFDP2Q14188 446 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 KRT81Q14533 505 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 PDK2Q15119 407 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 SCYL2Q6P3W7 929 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 CEP128Q6ZU80 1094 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 CROCCP2Q86T23 111 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 SH2D3CQ8N5H7 860 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 ADAM2Q99965 735 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 MED10Q9BTT4 135 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 OSBPL7Q9BZF2 842 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 EPB41L4BQ9H329 900 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 CACNG4Q9UBN1 327 aa11.97□□□□□ -0.49
LINC01278-204ENST00000609143 CASTOR2A6NHX0 329 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 APOC4-APOC2K7ER74 178 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 ATP2C2O75185 946 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 ENDOD1O94919 500 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 APOC2P02655 101 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 NPR3P17342 541 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 ARSEP51690 589 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 P3H1Q32P28 736 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 EFHC1Q5JVL4 640 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 AGBL2Q5U5Z8 902 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 CYP4V2Q6ZWL3 525 aaPredicted RBP11.96□□□□□ -0.49
LINC01278-204ENST00000609143 PIGZQ86VD9 579 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 SYT15Q9BQS2 421 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
LINC01278-204ENST00000609143 FOXP3Q9BZS1 431 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 SGK1O00141 431 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 RIPK2O43353 540 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 IBSPP21815 317 aaPredicted RBP11.96□□□□□ -0.49
LINC01278-204ENST00000609143 GRIK3Q13003 919 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 SLC29A2Q14542 456 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 UPP1Q16831 310 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.96□□□□□ -0.49
LINC01278-204ENST00000609143 CLEC4CQ8WTT0 213 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 PCDH9Q9HC56 1237 aa11.96□□□□□ -0.49
LINC01278-204ENST00000609143 MCF2LO15068 1137 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 FAM200BP0CF97 657 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 NR1D1P20393 614 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 PAX3P23760 479 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 DPYSL3Q14195 570 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 RAB6CQ53S08 254 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 VSIG1Q86XK7 387 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 C3orf58Q8NDZ4 430 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 TMEM121Q9BTD3 319 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 RAB6CQ9H0N0 254 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 AAASQ9NRG9 546 aa11.96□□□□□ -0.5
LINC01278-204ENST00000609143 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.5
LINC01278-204ENST00000609143 A6NNZ2 444 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 DNALI1O14645 258 aaPredicted RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 MDM4O15151 490 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 POMCP01189 267 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 INHAP05111 366 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 ODC1P11926 461 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 IGFBP6P24592 240 aaPredicted RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 PCSK1P29120 753 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 SKOR1P84550 965 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 ADIGQ0VDE8 80 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 GPS1Q13098 491 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 ARHGEF6Q15052 776 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 TUBB8Q3ZCM7 444 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 DNAJC21Q5F1R6 531 aaKnown RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 HIBCHQ6NVY1 386 aaPredicted RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 ARFGAP2Q8N6H7 521 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 KCTD13Q8WZ19 329 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CDC42EP4Q9H3Q1 356 aaKnown RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 LRRC4Q9HBW1 653 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 BCCIPQ9P287 314 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 SAE1Q9UBE0 346 aaPredicted RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CDH9Q9ULB4 789 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CLDN5O00501 218 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 IFNB1P01574 187 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CHKAP35790 457 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 HDAC4P56524 1084 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 TUSC3Q13454 348 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 PAQR9Q6ZVX9 377 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 PRUNE1Q86TP1 453 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 METTL23Q86XA0 190 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 SPATA18Q8TC71 538 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 RSAD2Q8WXG1 361 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 UROC1Q96N76 676 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 DDX23Q9BUQ8 820 aaKnown RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CAPS2Q9BXY5 557 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 HMX1Q9NP08 348 aaPredicted RBP11.95□□□□□ -0.5
LINC01278-204ENST00000609143 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
LINC01278-204ENST00000609143 TPX2Q9ULW0 747 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms