RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ARMCX1Q9P291 453 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 SSX2IPQ9Y2D8 614 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 TRIM49D1C9J1S8 452 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 KRT3P12035 628 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 PRKCHP24723 683 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 BRD2P25440 801 aaKnown RBP23.29■■□□□ 1.32
SHANK2-220ENST00000608988 CDK7P50613 346 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 TMPRSS15P98073 1019 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 ROR1Q01973 937 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 BST1Q10588 318 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 EMC2Q15006 297 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 TEX44Q53QW1 395 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 ACAD11Q709F0 780 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 TREML1Q86YW5 311 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 IGDCC3Q8IVU1 814 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 WDTC1Q8N5D0 677 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 OR5B17Q8NGF7 314 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 DEPTORQ8TB45 409 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 LRRC39Q96DD0 335 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 CDHR1Q96JP9 859 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 TMEM134Q9H6X4 195 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 ZWILCHQ9H900 591 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 RAVER2Q9HCJ3 691 aaKnown RBP23.29■■□□□ 1.32
SHANK2-220ENST00000608988 TTLL3Q9Y4R7 772 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 PSME4Q14997 1843 aa23.29■■□□□ 1.32
SHANK2-220ENST00000608988 K7ERI5 159 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 SNNO75324 88 aaPredicted RBP23.28■■□□□ 1.32
SHANK2-220ENST00000608988 KCNA2P16389 499 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 AOC1P19801 751 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 MAP3K10Q02779 954 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 FAM47CQ5HY64 1035 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 SWSAP1Q6NVH7 229 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 BRSK2Q8IWQ3 736 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 ST13P4Q8IZP2 240 aaPredicted RBP23.28■■□□□ 1.32
SHANK2-220ENST00000608988 FAM71DQ8N9W8 422 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 PIP4K2CQ8TBX8 421 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 HAPLN2Q9GZV7 340 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 PAK5Q9P286 719 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 TBC1D30Q9Y2I9 924 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.28■■□□□ 1.32
SHANK2-220ENST00000608988 MED7O43513 233 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 RBP3P10745 1247 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 TGFB2P61812 414 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 SURF1Q15526 300 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 STXBP5Q5T5C0 1151 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 PRPF39Q86UA1 669 aaKnown RBP23.28■■□□□ 1.32
SHANK2-220ENST00000608988 CPXCR1Q8N123 301 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 KCTD6Q8NC69 237 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 PORCNQ9H237 461 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 CISHQ9NSE2 258 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 SAE1Q9UBE0 346 aaPredicted RBP23.28■■□□□ 1.32
SHANK2-220ENST00000608988 SLC7A8Q9UHI5 535 aa23.28■■□□□ 1.32
SHANK2-220ENST00000608988 E5RJQ4 531 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 KRT38O76015 456 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 RNF8O76064 485 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 C1QAP02745 245 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 IL1R2P27930 398 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 RFC1P35251 1148 aaPredicted RBP23.27■■□□□ 1.32
SHANK2-220ENST00000608988 NOMO1Q15155 1222 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 C1orf146Q5VVC0 180 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 FAM83AQ86UY5 434 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 NUDCD3Q8IVD9 361 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 JADE3Q92613 823 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 SPATA16Q9BXB7 569 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 GLIS2Q9BZE0 524 aaPredicted RBP23.27■■□□□ 1.32
SHANK2-220ENST00000608988 FAM96AQ9H5X1 160 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 COMMD3-BMI1R4GMX3 469 aa23.27■■□□□ 1.32
SHANK2-220ENST00000608988 GSTT1P30711 240 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 MAGEA6P43360 314 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 SERPINB9P50453 376 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 CNTN2Q02246 1040 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 CDC16Q13042 620 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 TFDP2Q14188 446 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 HSF5Q4G112 596 aaPredicted RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 C4orf22Q6V702 233 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 SDCCAG8Q86SQ7 713 aaPredicted RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 ARID3BQ8IVW6 561 aaPredicted RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 ARFGAP1Q8N6T3 406 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 STKLD1Q8NE28 680 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 RTP4Q96DX8 246 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 ACAP3Q96P50 834 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 THTPAQ9BU02 230 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 ZNF341Q9BYN7 854 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 DHX33Q9H6R0 707 aaKnown RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 JPH1Q9HDC5 661 aaPredicted RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 SOX13Q9UN79 622 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 HBS1LQ9Y450 684 aaKnown RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 CTDP1Q9Y5B0 961 aaPredicted RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 C2orf71A6NGG8 1288 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 ATG7O95352 703 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 UBTFL6P0CB48 400 aaPredicted RBP23.26■■□□□ 1.31
SHANK2-220ENST00000608988 IRX4P78413 519 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 LIN52Q52LA3 116 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 ABHD15Q6UXT9 468 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 CCNJLQ8IV13 435 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 SPATA18Q8TC71 538 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 MIS12Q9H081 205 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 NDUFA13Q9P0J0 144 aa23.26■■□□□ 1.31
SHANK2-220ENST00000608988 BUD23O43709 281 aaKnown RBP23.25■■□□□ 1.31
SHANK2-220ENST00000608988 PIAS1O75925 651 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms