RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
LINC00539-204ENST00000608957 HPS4Q9NQG7 708 aa12.24□□□□□ -0.45
LINC00539-204ENST00000608957 GTSE1Q9NYZ3 720 aa12.24□□□□□ -0.45
LINC00539-204ENST00000608957 UXTQ9UBK9 157 aaPredicted RBP12.24□□□□□ -0.45
LINC00539-204ENST00000608957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00539-204ENST00000608957 FAM186AA6NE01 2351 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 OTOL1A6NHN0 477 aaPredicted RBP12.23□□□□□ -0.45
LINC00539-204ENST00000608957 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
LINC00539-204ENST00000608957 TRIM66O15016 1216 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 MFAP3LO75121 409 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 SP9P0CG40 484 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 TRIM21P19474 475 aaKnown RBP12.23□□□□□ -0.45
LINC00539-204ENST00000608957 FMO5P49326 533 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 ZXDBP98169 803 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 USP4Q13107 963 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 ZNF77Q15935 545 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 SGSM1Q2NKQ1 1148 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 TRIM68Q6AZZ1 485 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 ACOT1Q86TX2 421 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 FAM35AQ86V20 835 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 CNGA4Q8IV77 575 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 LRRC8AQ8IWT6 810 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 CELF5Q8N6W0 485 aaKnown RBP12.23□□□□□ -0.45
LINC00539-204ENST00000608957 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
LINC00539-204ENST00000608957 ZMIZ2Q8NF64 920 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 FAM3CQ92520 227 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 SEMA4DQ92854 862 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 FAM83CQ9BQN1 747 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 LSM14BQ9BX40 385 aaKnown RBP12.23□□□□□ -0.45
LINC00539-204ENST00000608957 TTYH3Q9C0H2 523 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 TRPC7Q9HCX4 862 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 GKN1Q9NS71 199 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 TDP1Q9NUW8 608 aa12.23□□□□□ -0.45
LINC00539-204ENST00000608957 A0A1W2PQJ5 194 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
LINC00539-204ENST00000608957 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 SPECC1L-ADORA2AF8WAN1 911 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 MAN2B1O00754 1011 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 BEST1O76090 585 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 CHRNB1P11230 501 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 CCDC130P13994 396 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 ARSAP15289 507 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 CASP14P31944 242 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 CTHP32929 405 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 AVPR1AP37288 418 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 RPS9P46781 194 aaKnown RBP12.22□□□□□ -0.45
LINC00539-204ENST00000608957 NDST1P52848 882 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 NOP14P78316 857 aaKnown RBP12.22□□□□□ -0.45
LINC00539-204ENST00000608957 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 LRMPQ12912 555 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 GAS6Q14393 721 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 ZNF268Q14587 947 aaPredicted RBP12.22□□□□□ -0.45
LINC00539-204ENST00000608957 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 FUKQ8N0W3 1084 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 C12orf29Q8N999 325 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 CSGALNACT1Q8TDX6 532 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 TAF4BQ92750 862 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
LINC00539-204ENST00000608957 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 SMOQ99835 787 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 TMEM8AQ9HCN3 771 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 RBM12Q9NTZ6 932 aaKnown RBP12.22□□□□□ -0.45
LINC00539-204ENST00000608957 ZMYM5Q9UJ78 669 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 R4GN57 208 aa12.22□□□□□ -0.45
LINC00539-204ENST00000608957 PRR23AA6NEV1 266 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 TNFRSF10BO14763 440 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 P4HA2O15460 535 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 NRDCO43847 1150 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 STX10O60499 249 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CLSTN1O94985 981 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 ANXA13P27216 316 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 MAGEA9P43362 315 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 MXI1P50539 228 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 KPNA1P52294 538 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-204ENST00000608957 MLLT6P55198 1093 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-204ENST00000608957 ADKP55263 362 aaKnown RBP12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CCZ1BP86790 482 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CCZ1P86791 482 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-204ENST00000608957 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 MTAPQ13126 283 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 NEK11Q8NG66 645 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 SCAMP5Q8TAC9 235 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CPLX3Q8WVH0 158 aa12.21□□□□□ -0.45
LINC00539-204ENST00000608957 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms