RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
CTSA-214ENST00000606788 UBXN11Q5T124 520 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 PPP1R2P3Q6NXS1 205 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 NIPA2Q8N8Q9 360 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 SMG8Q8ND04 991 aaKnown RBP16.61■□□□□ 0.25
CTSA-214ENST00000606788 SLC35B2Q8TB61 432 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 P3H4Q92791 437 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 MED10Q9BTT4 135 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 WDR35Q9P2L0 1181 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 INPP5FQ9Y2H2 1132 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 SMIM35A0A1B0GVV1 85 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 KCNN4O15554 427 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 AGTP01019 485 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 KRT15P19012 456 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 OLFML1Q6UWY5 402 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 CYP4V2Q6ZWL3 525 aaPredicted RBP16.61■□□□□ 0.25
CTSA-214ENST00000606788 FAM228AQ86W67 206 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 CPT1BQ92523 772 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 RASA4BC9J798 803 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 RASA4O43374 803 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
CTSA-214ENST00000606788 MMP13P45452 471 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 ADIGQ0VDE8 80 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 NME3Q13232 169 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 DPYSL3Q14195 570 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 NBPF20Q3BBV1 942 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 SYDE1Q6ZW31 735 aaPredicted RBP16.61■□□□□ 0.25
CTSA-214ENST00000606788 BBS12Q6ZW61 710 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 KHSRPQ92945 711 aaKnown RBP eCLIP16.61■□□□□ 0.25
CTSA-214ENST00000606788 UBQLN1Q9UMX0 589 aaKnown RBP16.61■□□□□ 0.25
CTSA-214ENST00000606788 CDY2AQ9Y6F7 541 aa16.61■□□□□ 0.25
CTSA-214ENST00000606788 HIF1AQ16665 826 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 RNASEH2BQ5TBB1 312 aaKnown RBP16.6■□□□□ 0.25
CTSA-214ENST00000606788 ADGRF2Q8IZF7 708 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 ZCCHC9Q8N567 271 aaKnown RBP16.6■□□□□ 0.25
CTSA-214ENST00000606788 CCDC110Q8TBZ0 833 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 CABS1Q96KC9 395 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 VRTNQ9H8Y1 702 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 XPO7Q9UIA9 1087 aaKnown RBP16.6■□□□□ 0.25
CTSA-214ENST00000606788 HUS1O60921 280 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 KIAA0754O94854 1291 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 ELNP15502 786 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 RBL1P28749 1068 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 CPT1AP50416 773 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 HDAC4P56524 1084 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 SLC6A3Q01959 620 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 ZBTB6Q15916 424 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 PKN2Q16513 984 aaKnown RBP16.6■□□□□ 0.25
CTSA-214ENST00000606788 FAM47EQ6ZV65 393 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 CCDC185Q8N715 623 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 SLC35F5Q8WV83 523 aa16.6■□□□□ 0.25
CTSA-214ENST00000606788 MBLAC1A4D2B0 266 aaPredicted RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 POMCP01189 267 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 FKBP1BP68106 108 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 PURAQ00577 322 aaKnown RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 LMNB2Q03252 620 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 GBE1Q04446 702 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 DCAF6Q58WW2 860 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 ERMARDQ5T6L9 678 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 GDF6Q6KF10 455 aaPredicted RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 VSTM1Q6UX27 236 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 OTUD6BQ8N6M0 293 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 ATXN2LQ8WWM7 1075 aaKnown RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 PRCCQ92733 491 aaPredicted RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 SEC16BQ96JE7 1060 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 FGFR1OP2Q9NVK5 253 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 MIOSQ9NXC5 875 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 A0A1W2PPM1 405 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 WDR91A4D1P6 747 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 TCP11X1B4DZS4 312 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 HOXD8P13378 290 aaPredicted RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 BCAR1P56945 870 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 MAP3K7CLP57077 242 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 LILRA4P59901 499 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 BSPRYQ5W0U4 402 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 POLNQ7Z5Q5 900 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 IGDCC3Q8IVU1 814 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 CMASQ8NFW8 434 aaPredicted RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 CHMP6Q96FZ7 201 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 FAM129AQ9BZQ8 928 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 ALG13Q9NP73 1137 aaKnown RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 ETNK2Q9NVF9 386 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 MAGED2Q9UNF1 606 aaPredicted RBP16.59■□□□□ 0.25
CTSA-214ENST00000606788 ST3GAL5Q9UNP4 418 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 F8W810 466 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 CYB561D2O14569 222 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 PTGESO14684 152 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 RGS2P41220 211 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 GABRB2P47870 512 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 TAF6P49848 677 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 ROR1Q01973 937 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 SAPCD2Q86UD0 394 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 PIGZQ86VD9 579 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 FBXO36Q8NEA4 188 aa16.59■□□□□ 0.25
CTSA-214ENST00000606788 PCDH19Q8TAB3 1148 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms