RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 GLIS3Q8NEA6 775 aa18.9■□□□□ 0.62
CCDC12-212ENST00000605358 TNIP3Q96KP6 325 aa18.9■□□□□ 0.62
CCDC12-212ENST00000605358 ZNF396Q96N95 335 aaPredicted RBP18.9■□□□□ 0.62
CCDC12-212ENST00000605358 CDX4O14627 284 aaPredicted RBP18.89■□□□□ 0.61
CCDC12-212ENST00000605358 STX6O43752 255 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 CHRM1P11229 460 aaPredicted RBP18.89■□□□□ 0.61
CCDC12-212ENST00000605358 DHPSP49366 369 aaPredicted RBP18.89■□□□□ 0.61
CCDC12-212ENST00000605358 EHHADHQ08426 723 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 BMT2Q1RMZ1 405 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 HECTD3Q5T447 861 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 BTBD8Q5XKL5 378 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 TMEM92Q6UXU6 159 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 UNC13DQ70J99 1090 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 SYT12Q8IV01 421 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 ALLCQ8N6M5 410 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 TXNDC5Q8NBS9 432 aaKnown RBP18.89■□□□□ 0.61
CCDC12-212ENST00000605358 GOLGA5Q8TBA6 731 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 TMEM174Q8WUU8 243 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 NUSAP1Q9BXS6 441 aaKnown RBP18.89■□□□□ 0.61
CCDC12-212ENST00000605358 B3GNT5Q9BYG0 378 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 XYLT2Q9H1B5 865 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 ARHGEF4Q9NR80 690 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 SMPD4Q9NXE4 827 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 INVSQ9Y283 1065 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
CCDC12-212ENST00000605358 MYO18AQ92614 2054 aaKnown RBP18.88■□□□□ 0.61
CCDC12-212ENST00000605358 MYOFQ9NZM1 2061 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 PVALEFA0A1B0GWK0 134 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 FAM92AA1XBS5 289 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 HOXC11O43248 304 aaPredicted RBP18.88■□□□□ 0.61
CCDC12-212ENST00000605358 MAP3K13O43283 966 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 CUTAO60888 179 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 KLF8O95600 359 aaPredicted RBP18.88■□□□□ 0.61
CCDC12-212ENST00000605358 YEATS4O95619 227 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 BCKDHBP21953 392 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 SLC6A11P48066 632 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 SH3PXD2AQ5TCZ1 1133 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 SCFD1Q8WVM8 642 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 HPS3Q969F9 1004 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 FBXO32Q969P5 355 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 CCDC127Q96BQ5 260 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 ZNF518BQ9C0D4 1074 aa18.88■□□□□ 0.61
CCDC12-212ENST00000605358 CFAP47Q6ZTR5 3102 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 TMEM8BA6NDV4 472 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 SGK1O00141 431 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 COCHO43405 550 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 PHACTR2O75167 634 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
CCDC12-212ENST00000605358 TIE1P35590 1138 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 PI4KAP42356 2102 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 MYL6P60660 151 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 CLDN10P78369 228 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 IRX4P78413 519 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 LY6G5CQ5SRR4 150 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 SLC23A3Q6PIS1 610 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 RABEPKQ7Z6M1 372 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 ETFBKMTQ8IXQ9 262 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 PHTF2Q8N3S3 785 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 CEP76Q8TAP6 659 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 ZNF516Q92618 1163 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 PIGKQ92643 395 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 SMARCD1Q96GM5 515 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 DPEP3Q9H4B8 488 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 DMAP1Q9NPF5 467 aaPredicted RBP18.87■□□□□ 0.61
CCDC12-212ENST00000605358 TMEM30AQ9NV96 361 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 BCCIPQ9P287 314 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC12-212ENST00000605358 DEC1Q9P2X7 70 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 SH3BP1Q9Y3L3 701 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 STARD13Q9Y3M8 1113 aa18.87■□□□□ 0.61
CCDC12-212ENST00000605358 UPK3BL1B0FP48 263 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 UPK3BL2E5RIL1 263 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 CLIC2O15247 247 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 ZDHHC11BP0C7U3 371 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 P4HA1P13674 534 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 CYP2J2P51589 502 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 CACNA2D1P54289 1103 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 ZNF252P-AS1Q0IIN9 211 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 KNOP1Q1ED39 458 aaKnown RBP18.86■□□□□ 0.61
CCDC12-212ENST00000605358 MAP7D1Q3KQU3 841 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 PEAR1Q5VY43 1037 aaPredicted RBP18.86■□□□□ 0.61
CCDC12-212ENST00000605358 SLC36A4Q6YBV0 504 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 KDF1Q8NAX2 398 aaPredicted RBP18.86■□□□□ 0.61
CCDC12-212ENST00000605358 DHX58Q96C10 678 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 ZFRQ96KR1 1074 aaKnown RBP18.86■□□□□ 0.61
CCDC12-212ENST00000605358 FBXO44Q9H4M3 255 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 SLC32A1Q9H598 525 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 SPHK2Q9NRA0 654 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 TFIP11Q9UBB9 837 aaKnown RBP18.86■□□□□ 0.61
CCDC12-212ENST00000605358 NXF1Q9UBU9 619 aaKnown RBP18.86■□□□□ 0.61
CCDC12-212ENST00000605358 WASF3Q9UPY6 502 aa18.86■□□□□ 0.61
CCDC12-212ENST00000605358 PCNX2A6NKB5 2137 aa18.85■□□□□ 0.61
CCDC12-212ENST00000605358 TBC1D3BA6NDS4 549 aa18.85■□□□□ 0.61
CCDC12-212ENST00000605358 ZBTB24O43167 697 aaPredicted RBP18.85■□□□□ 0.61
CCDC12-212ENST00000605358 AP5Z1O43299 807 aa18.85■□□□□ 0.61
CCDC12-212ENST00000605358 EXOC3O60645 756 aa18.85■□□□□ 0.61
CCDC12-212ENST00000605358 ADAM23O75077 832 aa18.85■□□□□ 0.61
CCDC12-212ENST00000605358 HNRNPLP14866 589 aaKnown RBP eCLIP18.85■□□□□ 0.613e-8■■■■■ 39.8
CCDC12-212ENST00000605358 TRIM21P19474 475 aaKnown RBP18.85■□□□□ 0.61
CCDC12-212ENST00000605358 TRIM61Q5EBN2 209 aa18.85■□□□□ 0.61
CCDC12-212ENST00000605358 ZNF667Q5HYK9 610 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms