RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 DSCR3O14972 297 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 SCGB1D2O95969 90 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 CREB1P16220 341 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 PTDSS1P48651 473 aaKnown RBP6.17□□□□□ -1.42
TUBE1-205ENST00000603651 BCAT1P54687 386 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 LMAN2Q12907 356 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 TMEM65Q6PI78 240 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 BCDIN3DQ7Z5W3 292 aaKnown RBP6.17□□□□□ -1.42
TUBE1-205ENST00000603651 NANOGP1Q8N7R0 232 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
TUBE1-205ENST00000603651 ADAMTS18Q8TE60 1221 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 SUCLG2Q96I99 432 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 FAM118BQ9BPY3 351 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 TUBA8Q9NY65 449 aaPredicted RBP6.17□□□□□ -1.42
TUBE1-205ENST00000603651 TPCN1Q9ULQ1 816 aa6.17□□□□□ -1.42
TUBE1-205ENST00000603651 SCAF8Q9UPN6 1271 aaKnown RBP6.17□□□□□ -1.42
TUBE1-205ENST00000603651 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 FAM227AF5H4B4 570 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 BCAR3O75815 825 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 PIAS2O75928 621 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 MAP4K4O95819 1239 aaPredicted RBP6.16□□□□□ -1.42
TUBE1-205ENST00000603651 EPHA3P29320 983 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 UQCRC1P31930 480 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 PLCD1P51178 756 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 DAZAP2Q15038 168 aaPredicted RBP6.16□□□□□ -1.42
TUBE1-205ENST00000603651 PPP2R5AQ15172 486 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 MINDY4Q4G0A6 757 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 CXorf57Q6NSI4 855 aaKnown RBP6.16□□□□□ -1.42
TUBE1-205ENST00000603651 PTCHD4Q6ZW05 846 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 MICU3Q86XE3 530 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 RAB11FIP4Q86YS3 637 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 SFTPA1Q8IWL2 248 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 HS6ST2Q96MM7 605 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 FYTTD1Q96QD9 318 aaKnown RBP6.16□□□□□ -1.42
TUBE1-205ENST00000603651 TMEM60Q9H2L4 133 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 DDX20Q9UHI6 824 aaKnown RBP6.16□□□□□ -1.42
TUBE1-205ENST00000603651 ITGB1BP2Q9UKP3 347 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 OGDHLQ9ULD0 1010 aa6.16□□□□□ -1.42
TUBE1-205ENST00000603651 CYP2D7A0A087X1C5 515 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 TRIM43BA6NCK2 446 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 CD3EAPO15446 510 aaKnown RBP6.15□□□□□ -1.42
TUBE1-205ENST00000603651 RNF8O76064 485 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 S100BP04271 92 aaPredicted RBP6.15□□□□□ -1.42
TUBE1-205ENST00000603651 ITGB6P18564 788 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 CCT4P50991 539 aaKnown RBP6.15□□□□□ -1.42
TUBE1-205ENST00000603651 RPS16P62249 146 aaKnown RBP6.15□□□□□ -1.42
TUBE1-205ENST00000603651 SHC4Q6S5L8 630 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 CCDC149Q6ZUS6 474 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 TRIM43Q96BQ3 446 aaPredicted RBP6.15□□□□□ -1.42
TUBE1-205ENST00000603651 FAM204AQ9H8W3 233 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 SNX15Q9NRS6 342 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 DNMT3BQ9UBC3 853 aaKnown RBP6.15□□□□□ -1.42
TUBE1-205ENST00000603651 MGAT4CQ9UBM8 478 aa6.15□□□□□ -1.42
TUBE1-205ENST00000603651 MBD3L4A6NDZ8 208 aaPredicted RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 MBD3L3A6NE82 208 aaPredicted RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 A6NNZ2 444 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 RRP9O43818 475 aaKnown RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 ATP5F1P24539 256 aaPredicted RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 KLRC1P26715 233 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 DIO1P49895 249 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 GHRHRQ02643 423 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 TRIP6Q15654 476 aaKnown RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 CNGA2Q16280 664 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 PLEKHG6Q3KR16 790 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 ZNF260Q3ZCT1 412 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 CC2D1BQ5T0F9 858 aaKnown RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 FAM102BQ5T8I3 360 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 BHLHA9Q7RTU4 235 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 KIAA0319LQ8IZA0 1049 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 MAFAQ8NHW3 353 aaPredicted RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 OSR1Q8TAX0 266 aaPredicted RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 RSPRY1Q96DX4 576 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 VN1R3Q9BXE9 311 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 WDR26Q9H7D7 661 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 C1orf112Q9NSG2 853 aa6.14□□□□□ -1.43
TUBE1-205ENST00000603651 AFF4Q9UHB7 1163 aaKnown RBP6.14□□□□□ -1.43
TUBE1-205ENST00000603651 E5RJQ4 531 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 EXOC5O00471 708 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 FCHO1O14526 889 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 MT-CO3P00414 261 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 U2AF1L5P0DN76 240 aaPredicted RBP6.13□□□□□ -1.43
TUBE1-205ENST00000603651 CYP19A1P11511 503 aaPredicted RBP6.13□□□□□ -1.43
TUBE1-205ENST00000603651 NTSR1P30989 418 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 PGDP52209 483 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 TIRAPP58753 221 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 U2AF1Q01081 240 aaKnown RBP eCLIP6.13□□□□□ -1.43
TUBE1-205ENST00000603651 ZNF91Q05481 1191 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 ARHGEF7Q14155 803 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 SLC29A2Q14542 456 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 DENND2CQ68D51 928 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 JDP2Q8WYK2 163 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 CUL5Q93034 780 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 ZNF287Q9HBT7 754 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 XPNPEP3Q9NQH7 507 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 MID2Q9UJV3 735 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 L1RE1Q9UN81 338 aa6.13□□□□□ -1.43
TUBE1-205ENST00000603651 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.12□□□□□ -1.43
TUBE1-205ENST00000603651 AGPSO00116 658 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms