RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 DENND5BQ6ZUT9 1274 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 CD93Q9NPY3 652 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 PTPDC1A2A3K4 754 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 ZNF862O60290 1169 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 TRIM13O60858 407 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 SLC2A3P11169 496 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 GARTP22102 1010 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 MAGEA3P43357 314 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 PRKD1Q15139 912 aaPredicted RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 GDAP1Q8TB36 358 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 AENQ8WTP8 325 aaKnown RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 TMEM79Q9BSE2 394 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 FICDQ9BVA6 458 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 INTS2Q9H0H0 1204 aaKnown RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 TRPS1Q9UHF7 1281 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 GAKO14976 1311 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 TBX3O15119 743 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 XRCC1P18887 633 aaPredicted RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 SLC12A1Q13621 1099 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 PEA15Q15121 130 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 RHEBQ15382 184 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 STOX1Q6ZVD7 989 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 PPIL6Q8IXY8 311 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 GSPT2Q8IYD1 628 aaKnown RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 ACMSDQ8TDX5 336 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 HGH1Q9BTY7 390 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 RMI1Q9H9A7 625 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 CD320Q9NPF0 282 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 SEC31BQ9NQW1 1179 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 KIF17Q9P2E2 1029 aa3.51□□□□□ -1.85
NEB-218ENST00000603639 TNPO3Q9Y5L0 923 aaKnown RBP3.51□□□□□ -1.85
NEB-218ENST00000603639 TMCC2O75069 709 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 COQ9O75208 318 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TRIM49P0CI25 452 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TRIM49CP0CI26 452 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TBX2Q13207 712 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 ZFYVE28Q9HCC9 887 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 V9GYQ6 96 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 AGLP35573 1532 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 E9PCH4 1651 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 LRIG2O94898 1065 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 CEP170P1Q96L14 293 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 RBM15Q96T37 977 aaKnown RBP eCLIP3.5□□□□□ -1.85
NEB-218ENST00000603639 TRABDQ9H4I3 376 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 RSAD1Q9HA92 442 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 DDX18Q9NVP1 670 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 PCDHGB3Q9Y5G1 929 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 DENND4BO75064 1496 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 PDE8BO95263 885 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PABPC1LQ4VXU2 614 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 USP39Q53GS9 565 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 KLHL22Q53GT1 634 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 ESCO2Q56NI9 601 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 P3H2Q8IVL5 708 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 SPAG16Q8N0X2 631 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 GRIK2Q13002 908 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 KRT33BQ14525 404 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 MACC1Q6ZN28 852 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 ZNF589Q86UQ0 364 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 KIF18BQ86Y91 864 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 SH3PXD2BA1X283 911 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 LGALS16A8MUM7 142 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 UGT2B4P06133 528 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 SLC2A5P22732 501 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 AP3S2P59780 193 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 USP46P62068 366 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 LRRC74AQ0VAA2 488 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 UBE2R2Q712K3 238 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 PANX1Q96RD7 426 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PLIN2Q99541 437 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 SLC22A2O15244 555 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 EIF2DP41214 584 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 ACADSBP45954 432 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TYSND1Q2T9J0 566 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 LRRC38Q5VT99 294 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PIK3AP1Q6ZUJ8 805 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 STAG3L4Q8TBR4 150 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 MKL1Q969V6 931 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 C18orf25Q96B23 403 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 RHBDF1Q96CC6 855 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 GPN2Q9H9Y4 310 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 ASAP1Q9ULH1 1129 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 USP19O94966 1318 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 KPNA5O15131 536 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PTX3P26022 381 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 HNRNPH3P31942 346 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 CYP4F2P78329 520 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 CYP4F3Q08477 520 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PLCZ1Q86YW0 608 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TSPEARQ8WU66 669 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 HDAC2Q92769 488 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 NUP85Q9BW27 656 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 MYLK2Q9H1R3 596 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PCDHGB6Q9Y5F9 930 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 H7C1W4 665 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 FAM187BQ17R55 369 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 OR5T2Q8NGG2 359 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 ANKRD49Q8WVL7 239 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 STRBPQ96SI9 672 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms