RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CNTN6Q9UQ52 1028 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 SIT1Q9Y3P8 196 aa17.66■□□□□ 0.42
SSBP4-213ENST00000602088 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 O00370 1275 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 MAN2B1O00754 1011 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-213ENST00000602088 EEF1GP26641 437 aaKnown RBP17.65■□□□□ 0.42
SSBP4-213ENST00000602088 PON1P27169 355 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 PGFP49763 221 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 ZNF132P52740 706 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 NUBP1P53384 320 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 SLC8A3P57103 927 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 USP4Q13107 963 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 GOLGA7BQ2TAP0 167 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 TCP11X2Q5H9J9 407 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 HECTD3Q5T447 861 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 CDKAL1Q5VV42 579 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 ZNF852Q6ZMS4 543 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 ENOSF1Q7L5Y1 443 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 RBBP8NLQ8NC74 664 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-213ENST00000602088 NELL2Q99435 816 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 OSBPL6Q9BZF3 934 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 LTB4R2Q9NPC1 389 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 TLR8Q9NR97 1041 aaKnown RBP17.65■□□□□ 0.42
SSBP4-213ENST00000602088 GTSE1Q9NYZ3 720 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 HESX1Q9UBX0 185 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 USP3Q9Y6I4 520 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 PIAS3Q9Y6X2 628 aa17.65■□□□□ 0.42
SSBP4-213ENST00000602088 HELZP42694 1942 aaKnown RBP17.64■□□□□ 0.42
SSBP4-213ENST00000602088 CYP26A1O43174 497 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 COCHO43405 550 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 TUBP50607 506 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 BCAT1P54687 386 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 APBA1Q02410 837 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 TNK2Q07912 1038 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 PDE4CQ08493 712 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 MTF1Q14872 753 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 CNGA2Q16280 664 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 PKDCCQ504Y2 493 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 RAB41Q5JT25 222 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 CC2D1AQ6P1N0 951 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-213ENST00000602088 GJB7Q6PEY0 223 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 LCLAT1Q6UWP7 414 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 CCDC105Q8IYK2 499 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 FAM81BQ96LP2 452 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 PRRX2Q99811 253 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 ZSWIM1Q9BR11 485 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 C8orf33Q9H7E9 229 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-213ENST00000602088 CCSER2Q9H7U1 834 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 DLGAP2Q9P1A6 1054 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 APEX2Q9UBZ4 518 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-213ENST00000602088 CPQQ9Y646 472 aa17.64■□□□□ 0.41
SSBP4-213ENST00000602088 FAM170BA6NMN3 283 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 TULP2O00295 520 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 XPO1O14980 1071 aaKnown RBP17.63■□□□□ 0.41
SSBP4-213ENST00000602088 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
SSBP4-213ENST00000602088 KPNA1P52294 538 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-213ENST00000602088 MFAP3P55082 362 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 BST2Q10589 180 aaKnown RBP17.63■□□□□ 0.41
SSBP4-213ENST00000602088 RUNX3Q13761 415 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 UBXN2BQ14CS0 331 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 STILQ15468 1287 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 ITPRIPL2Q3MIP1 535 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 TRIM68Q6AZZ1 485 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 CAVIN1Q6NZI2 390 aaKnown RBP17.63■□□□□ 0.41
SSBP4-213ENST00000602088 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 TTC16Q8NEE8 873 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 PRSS33Q8NF86 280 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 TTC8Q8TAM2 541 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 OSCP1Q8WVF1 389 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 MSANTD3Q96H12 275 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 NMUR1Q9HB89 426 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 SIX2Q9NPC8 291 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 HPS4Q9NQG7 708 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 FANCLQ9NW38 375 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 OSER1Q9NX31 292 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 MRPS17Q9Y2R5 130 aaKnown RBP17.63■□□□□ 0.41
SSBP4-213ENST00000602088 MYO16Q9Y6X6 1858 aa17.63■□□□□ 0.41
SSBP4-213ENST00000602088 A0A1W2PQH9 124 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 SPECC1L-ADORA2AF8WAN1 911 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 LEFTY2O00292 366 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 GALR2O43603 387 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-213ENST00000602088 TLR5O60602 858 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 CALCAP01258 141 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 SETSIPP0DME0 302 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 MBL2P11226 248 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-213ENST00000602088 KRT5P13647 590 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 TARSP26639 723 aaKnown RBP17.62■□□□□ 0.41
SSBP4-213ENST00000602088 PLA2G4AP47712 749 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 SOX9P48436 509 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 MYL5Q02045 173 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 TYRO3Q06418 890 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 FZD5Q13467 585 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 DPY19L2P1Q6NXN4 242 aa17.62■□□□□ 0.41
SSBP4-213ENST00000602088 RALGPS2Q86X27 583 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms