RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	TUBA8	Q9NY65	449 aa	Predicted RBP	5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	DKK3	Q9UBP4	350 aa		5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	TMA7	Q9Y2S6	64 aa	Known RBP	5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	MRFAP1	Q9Y605	127 aa		5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	RAD54B	Q9Y620	910 aa		5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	PIK3C2A	O00443	1686 aa		5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	HTT	P42858	3142 aa		5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	USP47	Q96K76	1375 aa		5.27	□□□□□ -1.57
FARP1-238	ENST00000602015	PASK	Q96RG2	1323 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	BRCA1	P38398	1863 aa	Known RBP	5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	PKD1L3	Q7Z443	1732 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	VIRMA	Q69YN4	1812 aa	Known RBP	5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	ARFGEF1	Q9Y6D6	1849 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	LOC105371045	A0A1W2PR82	267 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	CCDC154	A6NI56	674 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	ZNF785	A8K8V0	405 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	PRRT4	C9JH25	899 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	F2RL2	O00254	374 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	TLR5	O60602	858 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	ARIH2	O95376	493 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	MAL	P21145	153 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	TCF15	Q12870	199 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	FHL1	Q13642	323 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	GTF2H3	Q13889	308 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	DTX2	Q86UW9	622 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	FAM109A	Q8N4B1	249 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	KLHDC4	Q8TBB5	520 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	NSUN6	Q8TEA1	469 aa	Known RBP	5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	DMRTA2	Q96SC8	542 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	WAC	Q9BTA9	647 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	MCM8	Q9UJA3	840 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	LIMCH1	Q9UPQ0	1083 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	SH2B3	Q9UQQ2	575 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	NFAT5	O94916	1531 aa		5.26	□□□□□ -1.57
FARP1-238	ENST00000602015	TISP43	B9A030	160 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	MMP10	P09238	476 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	JUP	P14923	745 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	C5AR1	P21730	350 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	PCSK6	P29122	969 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	ZNF135	P52742	658 aa	Predicted RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	POLG	P54098	1239 aa	Predicted RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	FOXG1	P55316	489 aa	Predicted RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	EEFSEC	P57772	596 aa	Known RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	PSMC1	P62191	440 aa	Known RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	INAVA	Q3KP66	663 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	CEP78	Q5JTW2	689 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	PXDC1	Q5TGL8	231 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	SLC4A10	Q6U841	1118 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	NECAB2	Q7Z6G3	386 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	CNTD1	Q8N815	330 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	QTRT1	Q9BXR0	403 aa	Known RBP	5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	PRSS22	Q9GZN4	317 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	SMOC2	Q9H3U7	446 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	POLH	Q9Y253	713 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	PRKAB1	Q9Y478	270 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	TAF1L	Q8IZX4	1826 aa		5.25	□□□□□ -1.57
FARP1-238	ENST00000602015	TTC21B	Q7Z4L5	1316 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	TTC21A	Q8NDW8	1320 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	UBR3	Q6ZT12	1888 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	SLC16A3	O15427	465 aa	Known RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	DNAJB5	O75953	348 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	TOP3B	O95985	862 aa	Known RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	RARB	P10826	455 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	EDNRB	P24530	442 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	KRT85	P78386	507 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	C3orf36	Q3SXR2	165 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	SUPT20HL1	Q3ZLR7	823 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	KHDC1	Q4VXA5	237 aa	Known RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	SMIM5	Q71RC9	77 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	KRT73	Q86Y46	540 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	GALNT16	Q8N428	558 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	ZCRB1	Q8TBF4	217 aa	Known RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	RGMA	Q96B86	450 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	COA7	Q96BR5	231 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	FAXDC2	Q96IV6	333 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	VRK1	Q99986	396 aa	Predicted RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	SLC5A4	Q9NY91	659 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	ELOVL5	Q9NYP7	299 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	C5	P01031	1676 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	N4BP2	Q86UW6	1770 aa	Predicted RBP	5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	CUL9	Q8IWT3	2517 aa		5.24	□□□□□ -1.57
FARP1-238	ENST00000602015	LAMA3	Q16787	3333 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	TOGARAM1	Q9Y4F4	1720 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	MUC3A	Q02505	3323 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	CYP2D7	A0A087X1C5	515 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	NT5C1B-RDH14	C9J2C7	533 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	SMIM22	K7EJ46	135 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	ZNF213	O14771	459 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	INSIG1	O15503	277 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	GNAI2	P04899	355 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	POU3F3	P20264	500 aa	Predicted RBP	5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	GCLC	P48506	637 aa	Predicted RBP	5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	PIK3CG	P48736	1102 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	TMF1	P82094	1093 aa		5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	HOXA4	Q00056	320 aa	Predicted RBP	5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	KIF23	Q02241	960 aa	Predicted RBP	5.23	□□□□□ -1.57
FARP1-238	ENST00000602015	SNAPC2	Q13487	334 aa		5.23	□□□□□ -1.57

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