RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 KAT7O95251 611 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 RPN1P04843 607 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 MYL6P60660 151 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 GAB4Q2WGN9 574 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 ZNF667Q5HYK9 610 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 BTBD8Q5XKL5 378 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 RHBDF2Q6PJF5 856 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 SHC4Q6S5L8 630 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 SLC9A9Q8IVB4 645 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 ZNF516Q92618 1163 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 TAF4BQ92750 862 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 B3GNT5Q9BYG0 378 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 XYLT2Q9H1B5 865 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 CFAP97Q9P2B7 532 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 NXF1Q9UBU9 619 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 CFAP45Q9UL16 551 aa18.92■□□□□ 0.62
SHKBP1-227ENST00000602011 FAM92AA1XBS5 289 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 SGSM1Q2NKQ1 1148 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 ANO7Q6IWH7 933 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 NELFCDQ8IXH7 590 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 OLIG1Q8TAK6 271 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 PARD3BQ8TEW8 1205 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 WHAMMQ8TF30 809 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 SMARCD1Q96GM5 515 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 SPACA7Q96KW9 195 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 EDEM2Q9BV94 578 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 ZNF518BQ9C0D4 1074 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 DNAI2Q9GZS0 605 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 FBXO44Q9H4M3 255 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 DMAP1Q9NPF5 467 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 ARHGEF4Q9NR80 690 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 SH3BP1Q9Y3L3 701 aa18.91■□□□□ 0.62
SHKBP1-227ENST00000602011 C4orf47A7E2U8 309 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 TNFRSF10BO14763 440 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 ADH5P11766 374 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 SPINK2P20155 84 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 SEC13P55735 322 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 LMAN2Q12907 356 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 BIRC3Q13489 604 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 NCOA4Q13772 614 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 LPCAT2Q7L5N7 544 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 CYP2U1Q7Z449 544 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 UNC93AQ86WB7 457 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 CEP57L1Q8IYX8 460 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 ABCA7Q8IZY2 2146 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 SMPD4Q9NXE4 827 aa18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 EVLQ9UI08 416 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-227ENST00000602011 MYO16Q9Y6X6 1858 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 C1QTNF9BB2RNN3 333 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 IKBKBO14920 756 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 ZBTB24O43167 697 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 HOXC11O43248 304 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 MAP3K13O43283 966 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 MYL1P05976 194 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 ZDHHC11BP0C7U3 371 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 C1QTNF9P0C862 333 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 CSRP1P21291 193 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 HOXD12P35452 270 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 CRYBG2Q8N1P7 616 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 CCDC33Q8N5R6 958 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 IL17RCQ8NAC3 791 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 TXNDC5Q8NBS9 432 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 MDGA1Q8NFP4 955 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 SNX21Q969T3 373 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 MED10Q9BTT4 135 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 TPSD1Q9BZJ3 242 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 DPEP3Q9H4B8 488 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 SLC39A2Q9NP94 309 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 TMEM9BQ9NQ34 198 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 DEC1Q9P2X7 70 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 CHORDC1Q9UHD1 332 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 ANAPC1Q9H1A4 1944 aa18.89■□□□□ 0.61
SHKBP1-227ENST00000602011 TBC1D3BA6NDS4 549 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 COCHO43405 550 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 KIF20AO95235 890 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 TOP3BO95985 862 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 C4BPAP04003 597 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 CEACAM1P13688 526 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 P2RY2P41231 377 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 KIR2DL1P43626 348 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 SLC6A11P48066 632 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 ME1P48163 572 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 NOVA1P51513 510 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 LY6G5CQ5SRR4 150 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 RESP18Q5W5W9 173 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 FAM35AQ86V20 835 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 NACA2Q9H009 215 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 GZF1Q9H116 711 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 DMAC2Q9NW81 257 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 USP25Q9UHP3 1055 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 STARD13Q9Y3M8 1113 aa18.88■□□□□ 0.61
SHKBP1-227ENST00000602011 LNP1A1A4G5 178 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 PATE3B3GLJ2 98 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 CLDN5O00501 218 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 PDXKO00764 312 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms