RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 CBFA2T2O43439 604 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 EXTL3O43909 919 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 CSDE1O75534 798 aaKnown RBP11.18□□□□□ -0.62
SMG9-207ENST00000598860 FGFR4P22455 802 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
SMG9-207ENST00000598860 ADSSP30520 456 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 HOXA11P31270 313 aaPredicted RBP11.18□□□□□ -0.62
SMG9-207ENST00000598860 PSMC2P35998 433 aaKnown RBP11.18□□□□□ -0.62
SMG9-207ENST00000598860 CYP2J2P51589 502 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 SURF1Q15526 300 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 CPSF6Q16630 551 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMG9-207ENST00000598860 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 CDKAL1Q5VV42 579 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 EEF1DP3Q658K8 133 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 TWF2Q6IBS0 349 aaKnown RBP11.18□□□□□ -0.62
SMG9-207ENST00000598860 LETMD1Q6P1Q0 360 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 SPRED2Q7Z698 418 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 FRMD5Q7Z6J6 570 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 FIBCD1Q8N539 461 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 SGSM3Q96HU1 749 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 CPB2Q96IY4 423 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 SAMD11Q96NU1 681 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 MED15Q96RN5 788 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 ADAM2Q99965 735 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 C17orf80Q9BSJ5 609 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 CCDC94Q9BW85 323 aaPredicted RBP11.18□□□□□ -0.62
SMG9-207ENST00000598860 KLHL25Q9H0H3 589 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 CDT1Q9H211 546 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 MTCH2Q9Y6C9 303 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 ZNF233A6NK53 670 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 DGKIO75912 1065 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 TPM2P07951 284 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 CLTAP09496 248 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 KRT13P13646 458 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 ZNF18P17022 549 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
SMG9-207ENST00000598860 BTG3Q14201 252 aaPredicted RBP11.17□□□□□ -0.62
SMG9-207ENST00000598860 LONRF2Q1L5Z9 754 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 EPC2Q52LR7 807 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 INTS8Q75QN2 995 aaKnown RBP11.17□□□□□ -0.62
SMG9-207ENST00000598860 GAS2L3Q86XJ1 694 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 BRSK2Q8IWQ3 736 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 CD302Q8IX05 232 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 LINC01599Q8WXQ3 324 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 RSPH1Q8WYR4 309 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 KREMEN1Q96MU8 473 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 TSPAN18Q96SJ8 248 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 LRRC4CQ9HCJ2 640 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 RGS18Q9NS28 235 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 TOPORSQ9NS56 1045 aaPredicted RBP11.17□□□□□ -0.62
SMG9-207ENST00000598860 LMCD1Q9NZU5 365 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
SMG9-207ENST00000598860 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 KCNJ18B7U540 433 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 TISP43B9A030 160 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 CYP26A1O43174 497 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 STX10O60499 249 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 MGEA5O60502 916 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 LPXNO60711 386 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 ZNF623O75123 536 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 AKAP3O75969 853 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 SLITRK5O94991 958 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 NPTXRO95502 500 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 CDK11BP21127 795 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 SSTR4P31391 388 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 RNF4P78317 190 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 SNRNP35Q16560 246 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 GDPD5Q8WTR4 605 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 ZNF689Q96CS4 500 aaPredicted RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 ZBTB45Q96K62 511 aaPredicted RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 CNOT6LQ96LI5 555 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 FAM213AQ9BRX8 229 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 PCIF1Q9H4Z3 704 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 RPF1Q9H9Y2 349 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 SAMSN1Q9NSI8 373 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 APEX2Q9UBZ4 518 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
SMG9-207ENST00000598860 RWDD3Q9Y3V2 267 aa11.16□□□□□ -0.62
SMG9-207ENST00000598860 A0A0U1RQF3 1178 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 A0A1W2PQU0 124 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 FAM189A1O60320 539 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 IL18RAPO95256 599 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 ASMTLO95671 621 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 RB1P06400 928 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 BMPR1AP36894 532 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 GRIK1P39086 918 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 ETV3P41162 512 aa11.15□□□□□ -0.62
SMG9-207ENST00000598860 MTIF2P46199 727 aaKnown RBP11.15□□□□□ -0.62
SMG9-207ENST00000598860 CASP4P49662 377 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms