RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CNTN6Q9UQ52 1028 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 SIT1Q9Y3P8 196 aa17.66■□□□□ 0.42
SSBP4-204ENST00000597724 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 O00370 1275 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 MAN2B1O00754 1011 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-204ENST00000597724 EEF1GP26641 437 aaKnown RBP17.65■□□□□ 0.42
SSBP4-204ENST00000597724 PON1P27169 355 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 PGFP49763 221 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 ZNF132P52740 706 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 NUBP1P53384 320 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 SLC8A3P57103 927 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 USP4Q13107 963 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 GOLGA7BQ2TAP0 167 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 TCP11X2Q5H9J9 407 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 HECTD3Q5T447 861 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 CDKAL1Q5VV42 579 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 ZNF852Q6ZMS4 543 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 ENOSF1Q7L5Y1 443 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 RBBP8NLQ8NC74 664 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-204ENST00000597724 NELL2Q99435 816 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 OSBPL6Q9BZF3 934 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 LTB4R2Q9NPC1 389 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 TLR8Q9NR97 1041 aaKnown RBP17.65■□□□□ 0.42
SSBP4-204ENST00000597724 GTSE1Q9NYZ3 720 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 HESX1Q9UBX0 185 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 USP3Q9Y6I4 520 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 PIAS3Q9Y6X2 628 aa17.65■□□□□ 0.42
SSBP4-204ENST00000597724 HELZP42694 1942 aaKnown RBP17.64■□□□□ 0.42
SSBP4-204ENST00000597724 CYP26A1O43174 497 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 COCHO43405 550 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 TUBP50607 506 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 BCAT1P54687 386 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 APBA1Q02410 837 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 TNK2Q07912 1038 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 PDE4CQ08493 712 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 MTF1Q14872 753 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 CNGA2Q16280 664 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 PKDCCQ504Y2 493 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 RAB41Q5JT25 222 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 CC2D1AQ6P1N0 951 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-204ENST00000597724 GJB7Q6PEY0 223 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 LCLAT1Q6UWP7 414 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 CCDC105Q8IYK2 499 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 FAM81BQ96LP2 452 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 PRRX2Q99811 253 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 ZSWIM1Q9BR11 485 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 C8orf33Q9H7E9 229 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-204ENST00000597724 CCSER2Q9H7U1 834 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 DLGAP2Q9P1A6 1054 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 APEX2Q9UBZ4 518 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-204ENST00000597724 CPQQ9Y646 472 aa17.64■□□□□ 0.41
SSBP4-204ENST00000597724 FAM170BA6NMN3 283 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 TULP2O00295 520 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 XPO1O14980 1071 aaKnown RBP17.63■□□□□ 0.41
SSBP4-204ENST00000597724 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
SSBP4-204ENST00000597724 KPNA1P52294 538 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-204ENST00000597724 MFAP3P55082 362 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 BST2Q10589 180 aaKnown RBP17.63■□□□□ 0.41
SSBP4-204ENST00000597724 RUNX3Q13761 415 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 UBXN2BQ14CS0 331 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 STILQ15468 1287 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 ITPRIPL2Q3MIP1 535 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 TRIM68Q6AZZ1 485 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 CAVIN1Q6NZI2 390 aaKnown RBP17.63■□□□□ 0.41
SSBP4-204ENST00000597724 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 TTC16Q8NEE8 873 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 PRSS33Q8NF86 280 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 TTC8Q8TAM2 541 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 OSCP1Q8WVF1 389 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 MSANTD3Q96H12 275 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 NMUR1Q9HB89 426 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 SIX2Q9NPC8 291 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 HPS4Q9NQG7 708 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 FANCLQ9NW38 375 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 OSER1Q9NX31 292 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 MRPS17Q9Y2R5 130 aaKnown RBP17.63■□□□□ 0.41
SSBP4-204ENST00000597724 MYO16Q9Y6X6 1858 aa17.63■□□□□ 0.41
SSBP4-204ENST00000597724 A0A1W2PQH9 124 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 SPECC1L-ADORA2AF8WAN1 911 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 LEFTY2O00292 366 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 GALR2O43603 387 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-204ENST00000597724 TLR5O60602 858 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 CALCAP01258 141 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 SETSIPP0DME0 302 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 MBL2P11226 248 aaPredicted RBP17.62■□□□□ 0.41
SSBP4-204ENST00000597724 KRT5P13647 590 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 TARSP26639 723 aaKnown RBP17.62■□□□□ 0.41
SSBP4-204ENST00000597724 PLA2G4AP47712 749 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 SOX9P48436 509 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 MYL5Q02045 173 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 TYRO3Q06418 890 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 FZD5Q13467 585 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 DPY19L2P1Q6NXN4 242 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 RALGPS2Q86X27 583 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms