RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SLC8A3P57103 927 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 SMAD4Q13485 552 aaKnown RBP16.33■□□□□ 0.2
SMCO4-206ENST00000596676 TEAD2Q15562 447 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 CLEC16AQ2KHT3 1053 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 CYP4A22Q5TCH4 519 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 SMYD5Q6GMV2 418 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 PTCRAQ6ISU1 281 aaPredicted RBP16.33■□□□□ 0.2
SMCO4-206ENST00000596676 HFE2Q6ZVN8 426 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
SMCO4-206ENST00000596676 SCD5Q86SK9 330 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 SCUBE3Q8IX30 993 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 TMEM35BQ8NCS4 154 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 KCTD13Q8WZ19 329 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 FBXO32Q969P5 355 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 TRMT2BQ96GJ1 504 aaKnown RBP16.33■□□□□ 0.2
SMCO4-206ENST00000596676 PIWIL1Q96J94 861 aaKnown RBP16.33■□□□□ 0.2
SMCO4-206ENST00000596676 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 ZSWIM3Q96MP5 696 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
SMCO4-206ENST00000596676 LRRC4Q9HBW1 653 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 USP3Q9Y6I4 520 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 CLUHO75153 1309 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 OBSL1O75147 1896 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 MYO16Q9Y6X6 1858 aa16.33■□□□□ 0.2
SMCO4-206ENST00000596676 A0A1W2PQH9 124 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 RTN3O95197 1032 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 ABL1P00519 1130 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 UNGP13051 313 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 MTHFRP42898 656 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 RPL34P49207 117 aaKnown RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 TAF5Q15542 800 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 MEA1Q16626 185 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 GET4Q7L5D6 327 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 CNGA4Q8IV77 575 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 RIPOR3Q96MK2 946 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 MYADMQ96S97 322 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 ANAPC1Q9H1A4 1944 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 ATXN3LQ9H3M9 355 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 PNPLA8Q9NP80 782 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 NUDT5Q9UKK9 219 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 SCML2Q9UQR0 700 aa16.32■□□□□ 0.2
SMCO4-206ENST00000596676 MRPS23Q9Y3D9 190 aaKnown RBP16.32■□□□□ 0.2
SMCO4-206ENST00000596676 DENND4CQ5VZ89 1909 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 A0A087X0T9 212 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 FAM92AA1XBS5 289 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 C2orf78A6NCI8 922 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 YJEFN3A6XGL0 299 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 E7ENQ6 273 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 GJB6O95452 261 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 ZBED1O96006 694 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 FAM228BP0C875 321 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 PTP4A2Q12974 167 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 CYP26C1Q6V0L0 522 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 FAM183BPQ6ZVS7 135 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 TMEM110Q86TL2 294 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 SIX6OS1Q8N1H7 587 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 HSFY1Q96LI6 401 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 CEP295NLQ96MC4 621 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 CYP2S1Q96SQ9 504 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 SMG9Q9H0W8 520 aaKnown RBP16.31■□□□□ 0.2
SMCO4-206ENST00000596676 THEGQ9P2T0 379 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 ADAMTS1Q9UHI8 967 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 DENND4AQ7Z401 1863 aa16.31■□□□□ 0.2
SMCO4-206ENST00000596676 ZNF840PA6NDX5 716 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
SMCO4-206ENST00000596676 TBX18O95935 607 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 DAOAP59103 153 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-206ENST00000596676 GPR158Q5T848 1215 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 PM20D1Q6GTS8 502 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 OR6B2Q6IFH4 312 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 ACAD10Q6JQN1 1059 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 CCDC186Q7Z3E2 898 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 ERICH1Q86X53 443 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 FGF13Q92913 245 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 C11orf70Q9BRQ4 267 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 SLC46A2Q9BY10 475 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 AVENQ9NQS1 362 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-206ENST00000596676 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 DOCK8Q8NF50 2099 aa16.3■□□□□ 0.2
SMCO4-206ENST00000596676 TCF20Q9UGU0 1960 aaKnown RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 MDM4O15151 490 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 GRAP2O75791 330 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 ZDHHC11BP0C7U3 371 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 GBP2P32456 591 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 ACADSBP45954 432 aa16.29■□□□□ 0.2
SMCO4-206ENST00000596676 YWHAGP61981 247 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMCO4-206ENST00000596676 CENPCQ03188 943 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms