RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ORAI3Q9BRQ5 295 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 SEMA6CQ9H3T2 930 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 PSTPIP2Q9H939 334 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 PRDM8Q9NQV8 689 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ITM2CQ9NQX7 267 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 LATS2Q9NRM7 1088 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 RRN3Q9NYV6 651 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 TCEAL9Q9UHQ7 104 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 SLC5A6Q9Y289 635 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 USP20Q9Y2K6 914 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 GDAQ9Y2T3 454 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 ASB3Q9Y575 518 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 TLN2Q9Y4G6 2542 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 IGLV3-22A0A075B6J6 115 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 A0A0A0MRY4 1105 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 LY6G6EA0A0G2JKS1 128 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 hCG_1642624A0A1W2PR95 340 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 C2orf78A6NCI8 922 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 TTLL13PA6NNM8 815 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 EFCAB7A8K855 629 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 DDX11L8A8MPP1 907 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 PODXLO00592 558 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 SYN3O14994 580 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 VILLO15195 856 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 FFAR2O15552 330 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 DUX1O43812 170 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 SMARCA5O60264 1052 aaPredicted RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 DFNA5O60443 496 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 TSPAN3O60637 253 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 LARGE1O95461 756 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ITGB3P05106 788 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 PRKAR1AP10644 381 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ADH5P11766 374 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 KLK2P20151 261 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 AXLP30530 894 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 SLC6A4P31645 630 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 CLCN1P35523 988 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 RBMXP38159 391 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 GPR15P49685 360 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ADCY7P51828 1080 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 PDX1P52945 283 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 EMP3P54852 163 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 NPEPPSP55786 919 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 HDAC4P56524 1084 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ATP2C1P98194 919 aaPredicted RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 MBTD1Q05BQ5 628 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 FUT2Q10981 343 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ORC1Q13415 861 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 TAF12Q16514 161 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MGAT5BQ3V5L5 792 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 IFIT1BQ5T764 474 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 SDHAF4Q5VUM1 108 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 SLC27A1Q6PCB7 646 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 RHBDF2Q6PJF5 856 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 TRMT11Q7Z4G4 463 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 ITIH5Q86UX2 942 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MON1AQ86VX9 555 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 IQCA1Q86XH1 822 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 NOSTRINQ8IVI9 506 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 SMAP1Q8IYB5 467 aaPredicted RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 ZNF295-AS1Q8N0V1 137 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 TERB1Q8NA31 727 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 WDR36Q8NI36 951 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 FAM174AQ8TBP5 190 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MAPK15Q8TD08 544 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 NDRG1Q92597 394 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 MRPS31Q92665 395 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 DDX12PQ92771 950 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 GJA10Q969M2 543 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 P2RY11Q96G91 374 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MS4A3Q96HJ5 214 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 PPP1R10Q96QC0 940 aaKnown RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 GABRG3Q99928 467 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ZNF577Q9BSK1 485 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MFRPQ9BY79 579 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ACE2Q9BYF1 805 aaPredicted RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 TRIM8Q9BZR9 551 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 TRIM9Q9C026 710 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 ABCG4Q9H172 646 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 EBF2Q9HAK2 575 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 SENP2Q9HC62 589 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 OSGEPQ9NPF4 335 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 DISC1Q9NRI5 854 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MAFFQ9ULX9 164 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 MAGED2Q9UNF1 606 aaPredicted RBP3.33□□□□□ -1.88
VRK3-204ENST00000593912 MAP4K5Q9Y4K4 846 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 PCDHGB6Q9Y5F9 930 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 U3KQA8 63 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 RYR3Q15413 4870 aa3.33□□□□□ -1.88
VRK3-204ENST00000593912 CCDC187A0A096LP49 1063 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 PRAMEF33A0A0G2JMD5 474 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 PRRT4C9JH25 899 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 LEFTY2O00292 366 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 LZTS3O60299 673 aaPredicted RBP3.32□□□□□ -1.88
VRK3-204ENST00000593912 PRAMEF10O60809 474 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 TULP3O75386 442 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 PDGFAP04085 211 aa3.32□□□□□ -1.88
VRK3-204ENST00000593912 HMGA1P17096 107 aaKnown RBP3.32□□□□□ -1.88
VRK3-204ENST00000593912 ITIH1P19827 911 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms