RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 YWHAQP27348 245 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 CASP1P29466 404 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 UAP1L1Q3KQV9 507 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 LY6G5CQ5SRR4 150 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 TMEFF1Q8IYR6 380 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 B3GALNT2Q8NCR0 500 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 FBXO32Q969P5 355 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 ELMO3Q96BJ8 720 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 KCNK16Q96T55 309 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 BCCIPQ9P287 314 aaKnown RBP eCLIP18.58■□□□□ 0.56
RETREG3-212ENST00000593251 CHORDC1Q9UHD1 332 aaPredicted RBP18.58■□□□□ 0.56
RETREG3-212ENST00000593251 GON4LQ3T8J9 2241 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 C1QTNF9BB2RNN3 333 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 SPTLC2O15270 562 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 MAP3K13O43283 966 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 COCHO43405 550 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 ALDH1A2O94788 518 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 TOP3BO95985 862 aaKnown RBP18.57■□□□□ 0.56
RETREG3-212ENST00000593251 ADH1CP00326 375 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 C1QTNF9P0C862 333 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 P2RY2P41231 377 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 KIR2DL1P43626 348 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-212ENST00000593251 CASP4P49662 377 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 CDH8P55286 799 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 TRPC3Q13507 836 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 NUP93Q8N1F7 819 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 NAT16Q8N8M0 369 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 XXYLT1Q8NBI6 393 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 SCAMP5Q8TAC9 235 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 SCFD1Q8WVM8 642 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 HMGB4Q8WW32 186 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 ZSCAN16Q9H4T2 348 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-212ENST00000593251 SMYD3Q9H7B4 428 aa18.57■□□□□ 0.56
RETREG3-212ENST00000593251 POLMQ9NP87 494 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-212ENST00000593251 MBD1Q9UIS9 605 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-212ENST00000593251 ATXN2Q99700 1313 aaKnown RBP18.56■□□□□ 0.56
RETREG3-212ENST00000593251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
RETREG3-212ENST00000593251 TCRBV21S2A2A0A5A6 115 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 STX6O43752 255 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 ADAM23O75077 832 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 CLSTN1O94985 981 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 EIF2DP41214 584 aaKnown RBP18.56■□□□□ 0.56
RETREG3-212ENST00000593251 PTGER3P43115 390 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 AMPD3Q01432 767 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 TRIM61Q5EBN2 209 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 SCARA5Q6ZMJ2 495 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 DDX42Q86XP3 938 aaKnown RBP eCLIP18.56■□□□□ 0.56
RETREG3-212ENST00000593251 PGBD3Q8N328 593 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 PHTF2Q8N3S3 785 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 KIAA1958Q8N8K9 716 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 WHAMMQ8TF30 809 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 WBP2Q969T9 261 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 ZFRQ96KR1 1074 aaKnown RBP18.56■□□□□ 0.56
RETREG3-212ENST00000593251 MED10Q9BTT4 135 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 XYLT2Q9H1B5 865 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 BLZF1Q9H2G9 400 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 CUEDC2Q9H467 287 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 CCSER2Q9H7U1 834 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 TMEM74BQ9NUR3 256 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 TBC1D14Q9P2M4 693 aa18.56■□□□□ 0.56
RETREG3-212ENST00000593251 E2F8A0AVK6 867 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 PHACTR2O75167 634 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 RTN3O95197 1032 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-212ENST00000593251 PROS1P07225 676 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 FAM163BP0C2L3 166 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 IRF1P10914 325 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 GRIA2P42262 883 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 EOGTQ5NDL2 527 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 SHC4Q6S5L8 630 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 PAQR9Q6ZVX9 377 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 LPCAT2Q7L5N7 544 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 FAM35AQ86V20 835 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 PDZD8Q8NEN9 1154 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 DEFB124Q8NES8 71 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 PLEKHO2Q8TD55 490 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 SPACA7Q96KW9 195 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 C7orf25Q9BPX7 421 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 SLC39A2Q9NP94 309 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 SH3BP1Q9Y3L3 701 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 AKAP13Q12802 2813 aa18.55■□□□□ 0.56
RETREG3-212ENST00000593251 UBE4BO95155 1302 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 A0A0A0MRY4 1105 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 TRIM24O15164 1050 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 STAU1O95793 577 aaKnown RBP18.54■□□□□ 0.56
RETREG3-212ENST00000593251 TNFRSF4P43489 277 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 MAPK8P45983 427 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 SLC5A3P53794 718 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 GAD2Q05329 585 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 EHHADHQ08426 723 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 MAP7D1Q3KQU3 841 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 HECTD3Q5T447 861 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 CNNM4Q6P4Q7 775 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 UNQ6494/PRO21346Q6UXR6 183 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 UNC13DQ70J99 1090 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 BBS7Q8IWZ6 715 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 DEFB119Q8N690 84 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 IQUBQ8NA54 791 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
RETREG3-212ENST00000593251 ERLEC1Q96DZ1 483 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 INTS4Q96HW7 963 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms