RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 HDCP19113 662 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 SMYD5Q6GMV2 418 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 CELF5Q8N6W0 485 aaKnown RBP16.16■□□□□ 0.18
TRIM47-206ENST00000592942 DEPDC1BQ8WUY9 529 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 FBXO44Q9H4M3 255 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 NMUR1Q9HB89 426 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 TRPC7Q9HCX4 862 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 SIK3Q9Y2K2 1263 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 PATJQ8NI35 1801 aa16.16■□□□□ 0.18
TRIM47-206ENST00000592942 TRAV19A0A0A6YYK7 116 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 SMTNL1A8MU46 457 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
TRIM47-206ENST00000592942 XPO1O14980 1071 aaKnown RBP16.15■□□□□ 0.18
TRIM47-206ENST00000592942 USP17L7P0C7H9 530 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 KRT5P13647 590 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 GDI1P31150 447 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 CLCN1P35523 988 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 AVPR1AP37288 418 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 BCAT1P54687 386 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 SLC7A9P82251 487 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 SLC44A4Q53GD3 710 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 PM20D1Q6GTS8 502 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 PMF1Q6P1K2 205 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 CCDC186Q7Z3E2 898 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 SCD5Q86SK9 330 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 PDZD8Q8NEN9 1154 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 BPIFB1Q8TDL5 484 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 ZNF606Q8WXB4 792 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 PBXIP1Q96AQ6 731 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 GANQ9H2C0 597 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 CBX8Q9HC52 389 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 PLCB1Q9NQ66 1216 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 TRPV5Q9NQA5 729 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 FHOD1Q9Y613 1164 aa16.15■□□□□ 0.18
TRIM47-206ENST00000592942 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 EPHB6O15197 1021 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 CHADO15335 359 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 CYP26A1O43174 497 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 COCHO43405 550 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 ABL1P00519 1130 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 PNMA6AP0CW24 399 aaPredicted RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 UCHL3P15374 230 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 TCF3P15923 654 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 GPD2P43304 727 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 BST2Q10589 180 aaKnown RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 DRAP1Q14919 205 aaPredicted RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 ZNF77Q15935 545 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 SIX5Q8N196 739 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 KCTD13Q8WZ19 329 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 NDRG1Q92597 394 aaKnown RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 ZFYVE19Q96K21 471 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 ZFRQ96KR1 1074 aaKnown RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 FAM83CQ9BQN1 747 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 LSM14BQ9BX40 385 aaKnown RBP16.14■□□□□ 0.17
TRIM47-206ENST00000592942 CCSER2Q9H7U1 834 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 HESX1Q9UBX0 185 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 CA14Q9ULX7 337 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 ARHGAP26Q9UNA1 814 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 COL4A3Q01955 1670 aa16.14■□□□□ 0.17
TRIM47-206ENST00000592942 PIEZO1Q92508 2521 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 A0A1W2PQH9 124 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 DPYSL4O14531 572 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 ZNF263O14978 683 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 TEX33O43247 280 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 TBX18O95935 607 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
TRIM47-206ENST00000592942 TUBP50607 506 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 STARD6P59095 220 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 STILQ15468 1287 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 HECTD3Q5T447 861 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 DENND1BQ6P3S1 775 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 ZNF276Q8N554 614 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 WDTC1Q8N5D0 677 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 IRF7Q92985 503 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 ERGIC2Q96RQ1 377 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 DDX23Q9BUQ8 820 aaKnown RBP16.13■□□□□ 0.17
TRIM47-206ENST00000592942 BRD9Q9H8M2 597 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
TRIM47-206ENST00000592942 CYLDQ9NQC7 956 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 GKN1Q9NS71 199 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 CYTH4Q9UIA0 394 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 FBXL21Q9UKT6 434 aa16.13■□□□□ 0.17
TRIM47-206ENST00000592942 OTOL1A6NHN0 477 aaPredicted RBP16.12■□□□□ 0.17
TRIM47-206ENST00000592942 CKMP06732 381 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 SETSIPP0DME0 302 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 USP8P40818 1118 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 TKTL1P51854 596 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 PFKPQ01813 784 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 UBXN1Q04323 297 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 USP4Q13107 963 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 SYCP1Q15431 976 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 CWF19L1Q69YN2 538 aaKnown RBP16.12■□□□□ 0.17
TRIM47-206ENST00000592942 LUZP1Q86V48 1076 aa16.12■□□□□ 0.17
TRIM47-206ENST00000592942 SLC47A2Q86VL8 602 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms