RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 RASAL3Q86YV0 1011 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 KIAA1191Q96A73 305 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 SGCZQ96LD1 299 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 HAPLN3Q96S86 360 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 ELAC2Q9BQ52 826 aaKnown RBP4.12□□□□□ -1.75
VMP1-212ENST00000591782 KLK15Q9H2R5 256 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 FAM83DQ9H4H8 585 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 CERS4Q9HA82 394 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 HEYLQ9NQ87 328 aaPredicted RBP4.12□□□□□ -1.75
VMP1-212ENST00000591782 ASB6Q9NWX5 421 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 DLL3Q9NYJ7 618 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 SLC17A6Q9P2U8 582 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 ZNHIT2Q9UHR6 403 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 PADI4Q9UM07 663 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 CAPN11Q9UMQ6 739 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 DRG1Q9Y295 367 aaKnown RBP4.12□□□□□ -1.75
VMP1-212ENST00000591782 ENTPD2Q9Y5L3 495 aa4.12□□□□□ -1.75
VMP1-212ENST00000591782 PLEKHD1A6NEE1 506 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 GCOM1H8Y6P7 765 aaPredicted RBP4.11□□□□□ -1.75
VMP1-212ENST00000591782 AREL1O15033 823 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 FGF18O76093 207 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 NUDT3O95989 172 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 DRD4P21917 467 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 ITPKBP27987 946 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 EPHA3P29320 983 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 NTSR1P30989 418 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 PGDP52209 483 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 TPTEP56180 551 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 IRX3P78415 501 aaPredicted RBP4.11□□□□□ -1.75
VMP1-212ENST00000591782 TIAL1Q01085 375 aaKnown RBP eCLIP4.11□□□□□ -1.754e-22■■■■■ 37
VMP1-212ENST00000591782 CYP1B1Q16678 543 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 SLC35G1Q2M3R5 365 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 AKNAD1Q5T1N1 836 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 MANEALQ5VSG8 457 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 IZUMO3Q5VZ72 239 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 ANKRD16Q6P6B7 361 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 CATSPERGQ6ZRH7 1159 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 ARHGEF25Q86VW2 580 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 FAM186BQ8IYM0 893 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 TXLNBQ8N3L3 684 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 BRI3BPQ8WY22 251 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 GJA10Q969M2 543 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 DPCDQ9BVM2 203 aaPredicted RBP4.11□□□□□ -1.75
VMP1-212ENST00000591782 VN1R3Q9BXE9 311 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 ZNF700Q9H0M5 742 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 RIOX1Q9H6W3 641 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 NLRC4Q9NPP4 1024 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 DUSP22Q9NRW4 184 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 SLC52A1Q9NWF4 448 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 CCNL1Q9UK58 526 aaPredicted RBP4.11□□□□□ -1.75
VMP1-212ENST00000591782 GABRQQ9UN88 632 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 HPSEQ9Y251 543 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 MAN2B2Q9Y2E5 1009 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 INSL6Q9Y581 213 aa4.11□□□□□ -1.75
VMP1-212ENST00000591782 QSOX1O00391 747 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 ANP32CO43423 234 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 NDST3O95803 873 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 FAM163BP0C2L3 166 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 MYL4P12829 197 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 ABCB4P21439 1286 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 CTGFP29279 349 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 SERPINB3P29508 390 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 ATICP31939 592 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 TNNT2P45379 298 aaPredicted RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 MTHFSP49914 203 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 GATMP50440 423 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 EEFSECP57772 596 aaKnown RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 TIRAPP58753 221 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 CALD1Q05682 793 aaKnown RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 HDAC1Q13547 482 aaPredicted RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 FAM153CQ494X1 144 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 CC2D1BQ5T0F9 858 aaKnown RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 XRRA1Q6P2D8 792 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 CRTC1Q6UUV9 634 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 Q6ZWC4 215 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 PARS2Q7L3T8 475 aaKnown RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 BEND5Q7L4P6 421 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 KRT28Q7Z3Y7 464 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 WDR53Q7Z5U6 358 aaPredicted RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 AMIGO2Q86SJ2 522 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 SKAP1Q86WV1 359 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 FANCBQ8NB91 859 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 RP9Q8TA86 221 aaKnown RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 RSPRY1Q96DX4 576 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 SLC39A13Q96H72 371 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 ZNF668Q96K58 619 aaPredicted RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 FAM227BQ96M60 508 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 UROC1Q96N76 676 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 PRR25Q96S07 402 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 TIMP4Q99727 224 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 SELENOOQ9BVL4 669 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 MAGEB5Q9BZ81 275 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 INO80BQ9C086 356 aaPredicted RBP4.1□□□□□ -1.75
VMP1-212ENST00000591782 CPNE5Q9HCH3 593 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 SEMA4GQ9NTN9 838 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 DNAJB11Q9UBS4 358 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 VPS51Q9UID3 782 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 ADAM21Q9UKJ8 722 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 RIMKLBQ9ULI2 386 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms