RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 GMIPQ9P107 970 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 KIAA1257Q9ULG3 409 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 ARHGAP26Q9UNA1 814 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 SCML2Q9UQR0 700 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 MRPS17Q9Y2R5 130 aaKnown RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 PCDHB4Q9Y5E5 795 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 F5P12259 2224 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 TICRRQ7Z2Z1 1910 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 GTPBP10A4D1E9 387 aaKnown RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 RNF225M0QZC1 329 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 COCHO43405 550 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 OLFM2O95897 454 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 PAEPP09466 180 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 ZDHHC11BP0C7U3 371 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 VDRP11473 427 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 CD19P15391 556 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TCF3P15923 654 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TARSP26639 723 aaKnown RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 PGFP49763 221 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TUBP50607 506 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 KIF11P52732 1056 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 SLC8A3P57103 927 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 SLC7A9P82251 487 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 ZXDBP98169 803 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TCF15Q12870 199 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 USP4Q13107 963 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 MTF1Q14872 753 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 MAN2A1Q16706 1144 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 EXOC3L4Q17RC7 722 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 GOLGA7BQ2TAP0 167 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 ITPRIPL2Q3MIP1 535 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TRIM68Q6AZZ1 485 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TRIM65Q6PJ69 517 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 SASS6Q6UVJ0 657 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 GBP6Q6ZN66 633 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TTC30AQ86WT1 665 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 CCDC105Q8IYK2 499 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 DTWD2Q8NBA8 298 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TTC8Q8TAM2 541 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 FAM3CQ92520 227 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 KREMEN1Q96MU8 473 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TUBGCP2Q9BSJ2 902 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 UBXN6Q9BZV1 441 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 EBF3Q9H4W6 596 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 CCSER2Q9H7U1 834 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 UBE2TQ9NPD8 197 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TLR8Q9NR97 1041 aaKnown RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 SAMSN1Q9NSI8 373 aaKnown RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 SMPD4Q9NXE4 827 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 DLGAP2Q9P1A6 1054 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 HESX1Q9UBX0 185 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 TSPAN16Q9UKR8 245 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 NDRG2Q9UN36 371 aaKnown RBP9.7□□□□□ -0.86
DNMT1-223ENST00000591239 CPQQ9Y646 472 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 COL4A2P08572 1712 aa9.7□□□□□ -0.86
DNMT1-223ENST00000591239 OTOL1A6NHN0 477 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 KCNJ18B7U540 433 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 SPECC1L-ADORA2AF8WAN1 911 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 LEFTY2O00292 366 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 O00370 1275 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 NCAM2O15394 837 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 CYP26A1O43174 497 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 PRKCSHP14314 528 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 ARSAP15289 507 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 SLC9A1P19634 815 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 PON1P27169 355 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 CTHP32929 405 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 SOX9P48436 509 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 ZNF132P52740 706 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 BCAT1P54687 386 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 PTPN5P54829 565 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 BST2Q10589 180 aaKnown RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 FZD5Q13467 585 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 RUNX3Q13761 415 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 KCNJ12Q14500 433 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 PDGFRLQ15198 375 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 VWA3BQ502W6 1294 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 TCP11X2Q5H9J9 407 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 MIIPQ5JXC2 388 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 C1orf228Q6PIY5 440 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 ENOSF1Q7L5Y1 443 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 CCDC186Q7Z3E2 898 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 PIGZQ86VD9 579 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 RALGPS2Q86X27 583 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 ZNF687Q8N1G0 1237 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 RBBP8NLQ8NC74 664 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 PATJQ8NI35 1801 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 ENOX1Q8TC92 643 aaKnown RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 OSCP1Q8WVF1 389 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 TFAP2BQ92481 460 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 CLDN23Q96B33 292 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 MSANTD3Q96H12 275 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 NDST4Q9H3R1 872 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 HPS4Q9NQG7 708 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 ANO10Q9NW15 660 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 OSER1Q9NX31 292 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 DUS2Q9NX74 493 aaKnown RBP9.69□□□□□ -0.86
DNMT1-223ENST00000591239 TMEM63CQ9P1W3 806 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms