RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ARHGAP20Q9P2F6 1191 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 MSRAQ9UJ68 235 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 NOCTQ9UK39 431 aaKnown RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PPP2R2CQ9Y2T4 447 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PCDHA13Q9Y5I0 950 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PCDHA11Q9Y5I1 949 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 SCN1AP35498 2009 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PDE4DIPQ5VU43 2346 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 KRBA1A5PL33 1030 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 PJA2O43164 708 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SIN3BO75182 1162 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 FTLP02792 175 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SOD2P04179 222 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 URODP06132 367 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 FAM200BP0CF97 657 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 CDH5P33151 784 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 BMP8BP34820 402 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ARHGAP25P42331 645 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 MAGEA11P43364 429 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 TUFMP49411 452 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 RPL10AP62906 217 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SOX4Q06945 474 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 BST2Q10589 180 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 PLD1Q13393 1074 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ACAP1Q15027 740 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 PTPN14Q15678 1187 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 CLEC16AQ2KHT3 1053 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ASTE1Q2TB18 679 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 TIGD5Q53EQ6 642 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 FAM171A1Q5VUB5 890 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 WSCD1Q658N2 575 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 GJB7Q6PEY0 223 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SCARA5Q6ZMJ2 495 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.73□□□□□ -1.175e-7■■■□□ 18.5
SMAD4-210ENST00000590061 TOGARAM2Q6ZUX3 1019 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF571Q7Z3V5 609 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SLC47A2Q86VL8 602 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ERICH1Q86X53 443 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 TMEM139Q8IV31 216 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 CCAR2Q8N163 923 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ARHGAP18Q8N392 663 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SLC4A11Q8NBS3 891 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SLC30A5Q8TAD4 765 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SPPL2BQ8TCT7 592 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 GOLGA1Q92805 767 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 CYFIP2Q96F07 1278 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SMARCD1Q96GM5 515 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 IGSF21Q96ID5 467 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 RNPC3Q96LT9 517 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SYT15Q9BQS2 421 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 EMILIN2Q9BXX0 1053 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ISCUQ9H1K1 167 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SMYD3Q9H7B4 428 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 NGRNQ9NPE2 291 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 BRD7Q9NPI1 651 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 MRPL17Q9NRX2 175 aaKnown RBP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 RNF19AQ9NV58 838 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 MIOSQ9NXC5 875 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 RRN3Q9NYV6 651 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 GTF3C4Q9UKN8 822 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 L1RE1Q9UN81 338 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMAD4-210ENST00000590061 COL4A6Q14031 1691 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 SCN5AQ14524 2016 aa7.73□□□□□ -1.17
SMAD4-210ENST00000590061 ELOA3CA0A087WX78 387 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 A0A1W2PPC1 479 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ELOA3DA6NLF2 546 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ADARB2-AS1A8MUL3 147 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 O00370 1275 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 GNB5O14775 395 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF500O60304 480 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 DDHD2O94830 711 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ERBB2P04626 1255 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 CYP1A1P04798 512 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 GLI1P08151 1106 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ACRP10323 421 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 AMPD1P23109 780 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 WEE1P30291 646 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 PPP3CCP48454 512 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 SLC11A1P49279 550 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 GLUD2P49448 558 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 GUCY2FP51841 1108 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 HADHBP55084 474 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 NAP1L1P55209 391 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 TUBB4BP68371 445 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 MRPL58Q14197 206 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF268Q14587 947 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ELOA3BQ3SY89 546 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 CFAP221Q4G0U5 840 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 CTXN3Q4LDR2 81 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ACBD5Q5T8D3 534 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 RASIP1Q5U651 963 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 FUT10Q6P4F1 479 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms