RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 TUBP50607 506 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 NDST1P52848 882 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 SLC5A3P53794 718 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 HECTD3Q5T447 861 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 NAIF1Q69YI7 327 aaPredicted RBP15.22■□□□□ 0.03
MBD1-220ENST00000589758 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 FUKQ8N0W3 1084 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 FAM160A2Q8N612 972 aaPredicted RBP15.22■□□□□ 0.03
MBD1-220ENST00000589758 RTKNQ9BST9 563 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 DNAI2Q9GZS0 605 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 SEMA4GQ9NTN9 838 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 SMPD4Q9NXE4 827 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 CFAP97Q9P2B7 532 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 CHORDC1Q9UHD1 332 aaPredicted RBP15.22■□□□□ 0.03
MBD1-220ENST00000589758 ZNF292O60281 2723 aa15.22■□□□□ 0.03
MBD1-220ENST00000589758 E2F8A0AVK6 867 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 FAM92AA1XBS5 289 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 AXIN1O15169 862 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 PSMC2P35998 433 aaKnown RBP15.21■□□□□ 0.03
MBD1-220ENST00000589758 OPRD1P41143 372 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 EIF2DP41214 584 aaKnown RBP15.21■□□□□ 0.03
MBD1-220ENST00000589758 ASPAP45381 313 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 PXNP49023 591 aaPredicted RBP15.21■□□□□ 0.03
MBD1-220ENST00000589758 ATXN1P54253 815 aaKnown RBP15.21■□□□□ 0.03
MBD1-220ENST00000589758 ADAM9Q13443 819 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 DMC1Q14565 340 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 DHCR24Q15392 516 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 C1orf220Q5T0J3 134 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 FAM186BQ8IYM0 893 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 FMR1NBQ8N0W7 255 aaPredicted RBP15.21■□□□□ 0.03
MBD1-220ENST00000589758 CCDC150Q8NCX0 1101 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 NETO1Q8TDF5 533 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 EZH1Q92800 747 aaPredicted RBP15.21■□□□□ 0.03
MBD1-220ENST00000589758 ELMO3Q96BJ8 720 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 OTUB2Q96DC9 234 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 FBXO44Q9H4M3 255 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 CYP3A43Q9HB55 503 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 CSNK1G1Q9HCP0 422 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 EBF1Q9UH73 591 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 MAPK8IP1Q9UQF2 711 aa15.21■□□□□ 0.03
MBD1-220ENST00000589758 COCHO43405 550 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 APBB3O95704 486 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 ADH1CP00326 375 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 CYP17A1P05093 508 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 ZDHHC11BP0C7U3 371 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 CCDC130P13994 396 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 HOXC13P31276 330 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 GTF2H1P32780 548 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 MRPS21P82921 87 aaKnown RBP15.2■□□□□ 0.02
MBD1-220ENST00000589758 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 PRR23CQ6ZRP0 262 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 SCAMP5Q8TAC9 235 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 USP33Q8TEY7 942 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 HHIPQ96QV1 700 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 SMOQ99835 787 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 DUSP9Q99956 384 aaKnown RBP15.2■□□□□ 0.02
MBD1-220ENST00000589758 NT5C1AQ9BXI3 368 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 SH3BP1Q9Y3L3 701 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.2■□□□□ 0.02
MBD1-220ENST00000589758 ATG2BQ96BY7 2078 aa15.2■□□□□ 0.02
MBD1-220ENST00000589758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.19■□□□□ 0.02
MBD1-220ENST00000589758 K7EQS6 105 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 GCLMP48507 274 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 MAP3K7CLP57077 242 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 INCA1Q0VD86 236 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 GAB4Q2WGN9 574 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 EDRF1Q3B7T1 1238 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 HSF5Q4G112 596 aaPredicted RBP15.19■□□□□ 0.02
MBD1-220ENST00000589758 RHBDF2Q6PJF5 856 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 C12orf29Q8N999 325 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 ZMIZ2Q8NF64 920 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 TAS1R2Q8TE23 839 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 FAXDC2Q96IV6 333 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 ZC3H10Q96K80 434 aaKnown RBP15.19■□□□□ 0.02
MBD1-220ENST00000589758 PNKPQ96T60 521 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 HNRNPABQ99729 332 aaKnown RBP15.19■□□□□ 0.02
MBD1-220ENST00000589758 NIF3L1Q9GZT8 377 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 NACA2Q9H009 215 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 TMEM8AQ9HCN3 771 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 TLR8Q9NR97 1041 aaKnown RBP15.19■□□□□ 0.02
MBD1-220ENST00000589758 GMIPQ9P107 970 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 KIAA1549LQ6ZVL6 1849 aa15.19■□□□□ 0.02
MBD1-220ENST00000589758 RALGAPA1Q6GYQ0 2036 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 MED19A0JLT2 244 aaPredicted RBP15.18■□□□□ 0.02
MBD1-220ENST00000589758 BEST1O76090 585 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 EPN2O95208 641 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 APODP05090 189 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 FAM200BP0CF97 657 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 TRIM49P0CI25 452 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 TRIM49CP0CI26 452 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 ADH5P11766 374 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 MCCD1P59942 119 aaPredicted RBP15.18■□□□□ 0.02
MBD1-220ENST00000589758 GAD2Q05329 585 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 PPP3CAQ08209 521 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 ORC1Q13415 861 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 PNOCQ13519 176 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 PREPLQ4J6C6 727 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms