RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
POLR2E-206ENST00000589737 GZF1Q9H116 711 aaPredicted RBP16.05■□□□□ 0.16
POLR2E-206ENST00000589737 ARHGEF4Q9NR80 690 aa16.05■□□□□ 0.16
POLR2E-206ENST00000589737 AKAP13Q12802 2813 aa16.05■□□□□ 0.16
POLR2E-206ENST00000589737 ZFYVE26Q68DK2 2539 aa16.05■□□□□ 0.16
POLR2E-206ENST00000589737 PKD1L2Q7Z442 2459 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 ZZEF1O43149 2961 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.04■□□□□ 0.16
POLR2E-206ENST00000589737 C1QTNF9BB2RNN3 333 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 CLDN5O00501 218 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 TNFRSF10BO14763 440 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 ADAM23O75077 832 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 C1QTNF9P0C862 333 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 CEACAM1P13688 526 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 GRIA2P42262 883 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 ASIC1P78348 528 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 EHHADHQ08426 723 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 IFRD2Q12894 506 aaPredicted RBP16.04■□□□□ 0.16
POLR2E-206ENST00000589737 FOXC1Q12948 553 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 WDR72Q3MJ13 1102 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 EOGTQ5NDL2 527 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 LPCAT2Q7L5N7 544 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 ETFBKMTQ8IXQ9 262 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 PDZD8Q8NEN9 1154 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 PIGKQ92643 395 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 OTUB2Q96DC9 234 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 DUSP9Q99956 384 aaKnown RBP16.04■□□□□ 0.16
POLR2E-206ENST00000589737 B3GNT5Q9BYG0 378 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 XYLT2Q9H1B5 865 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 CUEDC2Q9H467 287 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 POLMQ9NP87 494 aaPredicted RBP16.04■□□□□ 0.16
POLR2E-206ENST00000589737 TBC1D14Q9P2M4 693 aa16.04■□□□□ 0.16
POLR2E-206ENST00000589737 MBD1Q9UIS9 605 aaPredicted RBP16.04■□□□□ 0.16
POLR2E-206ENST00000589737 A8MXQ7 604 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 COCHO43405 550 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 RTN3O95197 1032 aaPredicted RBP16.03■□□□□ 0.16
POLR2E-206ENST00000589737 YWHAQP27348 245 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 PTGER3P43115 390 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 TUBP50607 506 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 CYP2J2P51589 502 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 MYL6P60660 151 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 LMAN2Q12907 356 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 MAP7D1Q3KQU3 841 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 TRIM61Q5EBN2 209 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 LY6G5CQ5SRR4 150 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 EMC10Q5UCC4 262 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 PEAR1Q5VY43 1037 aaPredicted RBP16.03■□□□□ 0.16
POLR2E-206ENST00000589737 FAM35AQ86V20 835 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 NUP93Q8N1F7 819 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 FRMD1Q8N878 549 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 LINC00301Q8NCQ3 95 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 ZNF516Q92618 1163 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 FBXO32Q969P5 355 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 ZDHHC4Q9NPG8 344 aa16.03■□□□□ 0.16
POLR2E-206ENST00000589737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 CLIC2O15247 247 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 HOXC11O43248 304 aaPredicted RBP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 ATICP31939 592 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 TNFRSF4P43489 277 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SNRPFP62306 86 aaKnown RBP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 STK38Q15208 465 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SPDYCQ5MJ68 293 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SNX30Q5VWJ9 437 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SYT12Q8IV01 421 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 C12orf56Q8IXR9 622 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 TMEFF1Q8IYR6 380 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SCFD1Q8WVM8 642 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 HMGB4Q8WW32 186 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SYAP1Q96A49 352 aaPredicted RBP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 DHX58Q96C10 678 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 ADAM33Q9BZ11 813 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 SMYD3Q9H7B4 428 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 VRTNQ9H8Y1 702 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 TMEM74BQ9NUR3 256 aa16.02■□□□□ 0.16
POLR2E-206ENST00000589737 BCCIPQ9P287 314 aaKnown RBP eCLIP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 NXF1Q9UBU9 619 aaKnown RBP16.02■□□□□ 0.16
POLR2E-206ENST00000589737 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
POLR2E-206ENST00000589737 TCRBV21S2A2A0A5A6 115 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 FAM92AA1XBS5 289 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 PPP6R2O75170 966 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
POLR2E-206ENST00000589737 ZDHHC11BP0C7U3 371 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 SPINK2P20155 84 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 DPP6P42658 865 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 SLC5A3P53794 718 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 AMPD3Q01432 767 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 GAD2Q05329 585 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 TRPC3Q13507 836 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 BMT2Q1RMZ1 405 aa16.01■□□□□ 0.15
POLR2E-206ENST00000589737 UAP1L1Q3KQV9 507 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms