RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 RAD51CO43502 376 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 BEST1O76090 585 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TCF4P15884 667 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 SLC11A1P49279 550 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 FNTAP49354 379 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 GATMP50440 423 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 MAP3K7CLP57077 242 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 MRPS5P82675 430 aaKnown RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ADCY1Q08828 1119 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 DHX34Q14147 1143 aaKnown RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 CCDC14Q49A88 953 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 RAB41Q5JT25 222 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 DCP1BQ8IZD4 617 aaKnown RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 SCML4Q8N228 414 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 PRELID2Q8N945 189 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 SLITRK1Q96PX8 696 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 OSBPL8Q9BZF1 889 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 DMAP1Q9NPF5 467 aaPredicted RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 HOMER3Q9NSC5 361 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 MARCH5Q9NX47 278 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 EFR3BQ9Y2G0 817 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 VWA8A3KMH1 1905 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 SPTBN5Q9NRC6 3674 aaKnown RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 DAB1O75553 588 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 GRAP2O75791 330 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 HEXIM1O94992 359 aaKnown RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 MIPP30301 263 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 TKTL1P51854 596 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 KLF1Q13351 362 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 SIX1Q15475 284 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 ZFYVE27Q5T4F4 411 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 ZNF280DQ6N043 979 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 IFT20Q8IY31 132 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 EIF1ADQ8N9N8 165 aaKnown RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 CLEC4CQ8WTT0 213 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 VWCEQ96DN2 955 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 TBCBQ99426 244 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 CDX2Q99626 313 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 DDX23Q9BUQ8 820 aaKnown RBP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 ZCWPW1Q9H0M4 648 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 LRRC19Q9H756 370 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCBE1-203ENST00000589116 PCYOX1Q9UHG3 505 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 NR2E1Q9Y466 385 aa12.63□□□□□ -0.39
CCBE1-203ENST00000589116 CARNS1A5YM72 827 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 OR6C75A6NL08 312 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 HHLA1C9JL84 531 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 PRPSAP2O60256 369 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 DGKIO75912 1065 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 AMHP03971 560 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 GALTP07902 379 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 RARAP10276 462 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 RALAP11233 206 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 RAG1P15918 1043 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 FGFR3P22607 806 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 IL1R2P27930 398 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 MATKP42679 507 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 MRPL58Q14197 206 aaKnown RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 TAF5Q15542 800 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 TFDP3Q5H9I0 405 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 MFSD5Q6N075 450 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 FUT10Q6P4F1 479 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 SPOCD1Q6ZMY3 1216 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 STRADAQ7RTN6 431 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 ADAT2Q7Z6V5 191 aaKnown RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 LRRTM3Q86VH5 581 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 TMEM199Q8N511 208 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 CMASQ8NFW8 434 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 FAM172AQ8WUF8 416 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 HDAC7Q8WUI4 952 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 TEKT4Q8WW24 435 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 CENPIQ92674 756 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 MAGOHBQ96A72 148 aaKnown RBP12.62□□□□□ -0.39
CCBE1-203ENST00000589116 CFAP57Q96MR6 1250 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 TMLHEQ9NVH6 421 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 AMACRQ9UHK6 382 aa12.62□□□□□ -0.39
CCBE1-203ENST00000589116 COL4A6Q14031 1691 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 hCG_1818297A0A087WSY0 165 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 LRRD1A4D1F6 860 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TRIM43BA6NCK2 446 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 BHMG1C9JSJ3 638 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-203ENST00000589116 BAIAP3O94812 1187 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 TJP3O95049 919 aa12.61□□□□□ -0.39
CCBE1-203ENST00000589116 BDNFP23560 247 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms