RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 GTF2H1P32780 548 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 MAGEA9P43362 315 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 IFNAR2P48551 515 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 ZXDBP98169 803 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 GAS6Q14393 721 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 NCAPHQ15003 741 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 ZNF77Q15935 545 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 KRT39Q6A163 491 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 GPR179Q6PRD1 2367 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 UNC93AQ86WB7 457 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 CRYBG2Q8N1P7 616 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 TATDN2Q93075 761 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 SMARCD1Q96GM5 515 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 SLITRK1Q96PX8 696 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 SMOQ99835 787 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 NIF3L1Q9GZT8 377 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 NAT10Q9H0A0 1025 aaKnown RBP12.24□□□□□ -0.45
RFX1-204ENST00000588885 CHRDQ9H2X0 955 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 FBRSL1Q9HCM7 1045 aaKnown RBP12.24□□□□□ -0.45
RFX1-204ENST00000588885 C2orf42Q9NWW7 574 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 EHD2Q9NZN4 543 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 FBXO4Q9UKT5 387 aa12.24□□□□□ -0.45
RFX1-204ENST00000588885 ATG2BQ96BY7 2078 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 LEFTY2O00292 366 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 TNFRSF10BO14763 440 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 CAVIN2O95810 425 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 MBL2P11226 248 aaPredicted RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 HOXC13P31276 330 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 ID4P47928 161 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 PGFP49763 221 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 MXI1P50539 228 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 GALK1P51570 392 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 SLC5A3P53794 718 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 MLLT6P55198 1093 aaPredicted RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 FKBP3Q00688 224 aaKnown RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 SATB1Q01826 763 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 MYL5Q02045 173 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 STIM1Q13586 685 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 LRRC32Q14392 662 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 PDGFRLQ15198 375 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 CBWD6Q4V339 395 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 CBWD3Q5JTY5 395 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 CBWD5Q5RIA9 395 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 KIAA2013Q8IYS2 634 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 FBXL13Q8NEE6 735 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 ZMIZ2Q8NF64 920 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 WHAMMQ8TF30 809 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 OSCP1Q8WVF1 389 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 SECISBP2LQ93073 1101 aaKnown RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 CHFRQ96EP1 664 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 MSANTD3Q96H12 275 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 CEP295NLQ96MC4 621 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 HEXIM2Q96MH2 286 aaKnown RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 GRPEL1Q9HAV7 217 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
RFX1-204ENST00000588885 RAB20Q9NX57 234 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 GMIPQ9P107 970 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 NCDNQ9UBB6 729 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 ARHGAP26Q9UNA1 814 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 CPQQ9Y646 472 aa12.23□□□□□ -0.45
RFX1-204ENST00000588885 PSMA7O14818 248 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 STX10O60499 249 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
RFX1-204ENST00000588885 GJA4P35212 333 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 PPP1R2P41236 205 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 CXCL12P48061 93 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 PPP3CCP48454 512 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
RFX1-204ENST00000588885 LRMPQ12912 555 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 USP4Q13107 963 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 PPP2R5DQ14738 602 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 EML3Q32P44 896 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 ZNF528Q3MIS6 628 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 DGKKQ5KSL6 1271 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 HEATR6Q6AI08 1181 aaKnown RBP12.22□□□□□ -0.45
RFX1-204ENST00000588885 FSTL4Q6MZW2 842 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 C1orf228Q6PIY5 440 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 CPA6Q8N4T0 437 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 CYFIP2Q96F07 1278 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 ARID3AQ99856 593 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
RFX1-204ENST00000588885 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 POLR3BQ9NW08 1133 aaPredicted RBP12.22□□□□□ -0.45
RFX1-204ENST00000588885 ZSCAN32Q9NX65 697 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 CFAP97Q9P2B7 532 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
RFX1-204ENST00000588885 RWDD2AQ9UIY3 292 aa12.22□□□□□ -0.45
RFX1-204ENST00000588885 OBSL1O75147 1896 aa12.21□□□□□ -0.45
RFX1-204ENST00000588885 BECN2A8MW95 431 aa12.21□□□□□ -0.45
RFX1-204ENST00000588885 SLC16A3O15427 465 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms