RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CYP2U1Q7Z449 544 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 DDX42Q86XP3 938 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 HSCBQ8IWL3 235 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 PGBD3Q8N328 593 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 TXNDC5Q8NBS9 432 aaKnown RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 MDGA1Q8NFP4 955 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 JAKMIP2Q96AA8 810 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 KCNK16Q96T55 309 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 PNKPQ96T60 521 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 KRT82Q9NSB4 513 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 EXOC1Q9NV70 894 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 EBF1Q9UH73 591 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 CHORDC1Q9UHD1 332 aaPredicted RBP14.56□□□□□ -0.08
HDAC5-208ENST00000588419 MMP17Q9ULZ9 603 aa14.56□□□□□ -0.08
HDAC5-208ENST00000588419 MAP1BP46821 2468 aaKnown RBP14.55□□□□□ -0.08
HDAC5-208ENST00000588419 LRRIQ3A6PVS8 624 aaPredicted RBP14.55□□□□□ -0.08
HDAC5-208ENST00000588419 COCHO43405 550 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 ALDH1A2O94788 518 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 KAT7O95251 611 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 OLFM2O95897 454 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 F13A1P00488 732 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 ZSCAN22P10073 491 aaPredicted RBP14.55□□□□□ -0.08
HDAC5-208ENST00000588419 CCDC130P13994 396 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 ATICP31939 592 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 SLC5A3P53794 718 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 MESP2Q0VG99 397 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 NCOA4Q13772 614 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 PMS2CLQ68D20 193 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 PSAPL1Q6NUJ1 521 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 ACOT1Q86TX2 421 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 NAT16Q8N8M0 369 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 PDZD8Q8NEN9 1154 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 SCAMP5Q8TAC9 235 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 PLEKHO2Q8TD55 490 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 RLN3Q8WXF3 142 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 ERLEC1Q96DZ1 483 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 BACH2Q9BYV9 841 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 GZF1Q9H116 711 aaPredicted RBP14.55□□□□□ -0.08
HDAC5-208ENST00000588419 XYLT2Q9H1B5 865 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 CCSER2Q9H7U1 834 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 DMAP1Q9NPF5 467 aaPredicted RBP14.55□□□□□ -0.08
HDAC5-208ENST00000588419 GMIPQ9P107 970 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 SERTAD1Q9UHV2 236 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 ANGPTL2Q9UKU9 493 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 PCDHA7Q9UN72 937 aa14.55□□□□□ -0.08
HDAC5-208ENST00000588419 BCLAF3A2AJT9 711 aaKnown RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 C4orf47A7E2U8 309 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 SGK1O00141 431 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 AP1G2O75843 785 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 SNRPFP62306 86 aaKnown RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 MRPS21P82921 87 aaKnown RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 EHHADHQ08426 723 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 CRY1Q16526 586 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 BMT2Q1RMZ1 405 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 ANO4Q32M45 955 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 LY6G5CQ5SRR4 150 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 HECTD3Q5T447 861 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 EMC10Q5UCC4 262 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 CEP135Q66GS9 1140 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 TMEM92Q6UXU6 159 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 ADGRG2Q8IZP9 1017 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 HMGB4Q8WW32 186 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 PIGKQ92643 395 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 SMARCD1Q96GM5 515 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 TNIP3Q96KP6 325 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 SPACA7Q96KW9 195 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 CNOT6LQ96LI5 555 aaKnown RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 POLMQ9NP87 494 aaPredicted RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 FAM49BQ9NUQ9 324 aa14.54□□□□□ -0.08
HDAC5-208ENST00000588419 CGNQ9P2M7 1197 aaKnown RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 ATXN2Q99700 1313 aaKnown RBP14.54□□□□□ -0.08
HDAC5-208ENST00000588419 PVALEFA0A1B0GWK0 134 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 TCRBV21S2A2A0A5A6 115 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 LNP1A1A4G5 178 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.53□□□□□ -0.08
HDAC5-208ENST00000588419 PATE3B3GLJ2 98 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 MAP3K13O43283 966 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 KCNK5O95279 499 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 STAU1O95793 577 aaKnown RBP14.53□□□□□ -0.08
HDAC5-208ENST00000588419 HNRNPLP14866 589 aaKnown RBP eCLIP14.53□□□□□ -0.08
HDAC5-208ENST00000588419 ADORA2BP29275 332 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 PIK3CAP42336 1068 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 NOVA1P51513 510 aaKnown RBP14.53□□□□□ -0.08
HDAC5-208ENST00000588419 DLG4P78352 724 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 UAP1L1Q3KQV9 507 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 EOGTQ5NDL2 527 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 RESP18Q5W5W9 173 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 SPOPLQ6IQ16 392 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 RHBDF2Q6PJF5 856 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 C11orf74Q86VG3 221 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 BBS7Q8IWZ6 715 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 C12orf56Q8IXR9 622 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 KIAA0895Q8NCT3 520 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 GOLGA5Q8TBA6 731 aa14.53□□□□□ -0.08
HDAC5-208ENST00000588419 WHAMMQ8TF30 809 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms