RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 DDX42Q86XP3 938 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC01842-201ENST00000588275 ADGRG2Q8IZP9 1017 aa17.86■□□□□ 0.45
LINC01842-201ENST00000588275 ELMO3Q96BJ8 720 aa17.86■□□□□ 0.45
LINC01842-201ENST00000588275 ARHGEF4Q9NR80 690 aa17.86■□□□□ 0.45
LINC01842-201ENST00000588275 ATP8B3O60423 1300 aa17.86■□□□□ 0.45
LINC01842-201ENST00000588275 LAMA1P25391 3075 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 LNP1A1A4G5 178 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 RTN3O95197 1032 aaPredicted RBP17.85■□□□□ 0.45
LINC01842-201ENST00000588275 IRF1P10914 325 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 ATICP31939 592 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 NOVA1P51513 510 aaKnown RBP17.85■□□□□ 0.45
LINC01842-201ENST00000588275 SNRPFP62306 86 aaKnown RBP17.85■□□□□ 0.45
LINC01842-201ENST00000588275 MRPS21P82921 87 aaKnown RBP17.85■□□□□ 0.45
LINC01842-201ENST00000588275 MESP2Q0VG99 397 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 RHBDF2Q6PJF5 856 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 TMEM92Q6UXU6 159 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 ARMCX6Q7L4S7 300 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 FAM35AQ86V20 835 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 PDZD8Q8NEN9 1154 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 RLN3Q8WXF3 142 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 KCNK16Q96T55 309 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 GZF1Q9H116 711 aaPredicted RBP17.85■□□□□ 0.45
LINC01842-201ENST00000588275 MAGEF1Q9HAY2 307 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 CHORDC1Q9UHD1 332 aaPredicted RBP17.85■□□□□ 0.45
LINC01842-201ENST00000588275 SH3BP1Q9Y3L3 701 aa17.85■□□□□ 0.45
LINC01842-201ENST00000588275 PATE3B3GLJ2 98 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 SGK1O00141 431 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 KHNYNO15037 678 aaKnown RBP17.84■□□□□ 0.45
LINC01842-201ENST00000588275 COCHO43405 550 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 STAU1O95793 577 aaKnown RBP17.84■□□□□ 0.45
LINC01842-201ENST00000588275 FAM163BP0C2L3 166 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 HNRNPLP14866 589 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC01842-201ENST00000588275 SLC5A3P53794 718 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 CUL4BQ13620 913 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 ZNF667Q5HYK9 610 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 LY6G5CQ5SRR4 150 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 EMC10Q5UCC4 262 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 DAB2IPQ5VWQ8 1189 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 CNNM4Q6P4Q7 775 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 PGBD3Q8N328 593 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 NAT16Q8N8M0 369 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 IL17RCQ8NAC3 791 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 SCAMP5Q8TAC9 235 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 PIGKQ92643 395 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 SPACA7Q96KW9 195 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 NACA2Q9H009 215 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 XYLT2Q9H1B5 865 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 POLMQ9NP87 494 aaPredicted RBP17.84■□□□□ 0.45
LINC01842-201ENST00000588275 KRT82Q9NSB4 513 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 FAM13BQ9NYF5 915 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 TBC1D14Q9P2M4 693 aa17.84■□□□□ 0.45
LINC01842-201ENST00000588275 MYH10P35580 1976 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.83■□□□□ 0.44
LINC01842-201ENST00000588275 MAP3K13O43283 966 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 EIF2DP41214 584 aaKnown RBP17.83■□□□□ 0.44
LINC01842-201ENST00000588275 ME1P48163 572 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 EHHADHQ08426 723 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 ORC1Q13415 861 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 NCOA4Q13772 614 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 KNOP1Q1ED39 458 aaKnown RBP17.83■□□□□ 0.44
LINC01842-201ENST00000588275 BMT2Q1RMZ1 405 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 EOGTQ5NDL2 527 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 HECTD3Q5T447 861 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 GRAMD1CQ8IYS0 662 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 KIAA1958Q8N8K9 716 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 PLEKHO2Q8TD55 490 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 WHAMMQ8TF30 809 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 HMGB4Q8WW32 186 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 OVCA2Q8WZ82 227 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 TNIP3Q96KP6 325 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 CCSER2Q9H7U1 834 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 DMAP1Q9NPF5 467 aaPredicted RBP17.83■□□□□ 0.44
LINC01842-201ENST00000588275 TMEM9BQ9NQ34 198 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 GMIPQ9P107 970 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 CGNQ9P2M7 1197 aaKnown RBP17.83■□□□□ 0.44
LINC01842-201ENST00000588275 USP24Q9UPU5 2620 aa17.83■□□□□ 0.44
LINC01842-201ENST00000588275 TCRBV21S2A2A0A5A6 115 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 E2F8A0AVK6 867 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 LRRIQ3A6PVS8 624 aaPredicted RBP17.82■□□□□ 0.44
LINC01842-201ENST00000588275 GIPC1O14908 333 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 AP1G2O75843 785 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 CCDC130P13994 396 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 GRIA2P42262 883 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 GAD2Q05329 585 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 ANO4Q32M45 955 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 UAP1L1Q3KQV9 507 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 BTBD8Q5XKL5 378 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 C12orf56Q8IXR9 622 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 SMARCD1Q96GM5 515 aa17.82■□□□□ 0.44
LINC01842-201ENST00000588275 ATXN2Q99700 1313 aaKnown RBP17.81■□□□□ 0.44
LINC01842-201ENST00000588275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 PVALEFA0A1B0GWK0 134 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 TBC1D3BA6NDS4 549 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 ZNF252P-AS1Q0IIN9 211 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 FOXC1Q12948 553 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 SH3PXD2AQ5TCZ1 1133 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 LPCAT2Q7L5N7 544 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 BBS7Q8IWZ6 715 aa17.81■□□□□ 0.44
LINC01842-201ENST00000588275 TMEFF1Q8IYR6 380 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms