RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GCLMP48507 274 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 PGFP49763 221 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 VAMP7P51809 220 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 MESP2Q0VG99 397 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 DHCR24Q15392 516 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 CSRP2Q16527 193 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 SYT13Q7L8C5 426 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 CACNA2D4Q7Z3S7 1137 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 CAMKK1Q8N5S9 505 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 ZMIZ2Q8NF64 920 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 SMARCD1Q96GM5 515 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 SMOQ99835 787 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 ARRDC1-AS1Q9H2J1 176 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 CCSER2Q9H7U1 834 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 FAM49BQ9NUQ9 324 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 IL37Q9NZH6 218 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 TRAF3IP3Q9Y228 551 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 IKBKBO14920 756 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 DCLK1O15075 740 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 MAP3K7CLP57077 242 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 PPP3CAQ08209 521 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 C2orf27AQ580R0 203 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 HECTD3Q5T447 861 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 RHBDF2Q6PJF5 856 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 C12orf40Q86WS4 652 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 CRYBG2Q8N1P7 616 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 PDZD8Q8NEN9 1154 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 TAS1R2Q8TE23 839 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 USP33Q8TEY7 942 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 TAF4BQ92750 862 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 WBP2Q969T9 261 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 CCDC47Q96A33 483 aaKnown RBP15.2■□□□□ 0.02
VMP1-206ENST00000587945 ZFRQ96KR1 1074 aaKnown RBP15.2■□□□□ 0.02
VMP1-206ENST00000587945 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
VMP1-206ENST00000587945 APOBEC3GQ9HC16 384 aaKnown RBP15.2■□□□□ 0.02
VMP1-206ENST00000587945 OBSL1O75147 1896 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 A0A1W2PQ27 194 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 A0A1W2PQ64 194 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 A0A1W2PQD8 194 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 SLC9A3R1O14745 358 aaPredicted RBP15.19■□□□□ 0.02
VMP1-206ENST00000587945 ZNF202O95125 648 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 KIF20AO95235 890 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 APBB3O95704 486 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 ADORA2BP29275 332 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 SF3A2Q15428 464 aaKnown RBP15.19■□□□□ 0.02
VMP1-206ENST00000587945 FAM186BQ8IYM0 893 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 CCDC33Q8N5R6 958 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 NETO1Q8TDF5 533 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 OVCA2Q8WZ82 227 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 JAKMIP2Q96AA8 810 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 ACDQ96AP0 544 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 RTKNQ9BST9 563 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 SCAND2PQ9GZW5 306 aaPredicted RBP15.19■□□□□ 0.02
VMP1-206ENST00000587945 SMOC1Q9H4F8 434 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 INVSQ9Y283 1065 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
VMP1-206ENST00000587945 NCOR2Q9Y618 2525 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 FAM92AA1XBS5 289 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 MAPK13O15264 365 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 ZDHHC11BP0C7U3 371 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 IRF1P10914 325 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 ADH5P11766 374 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 KRT13P13646 458 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 DGKEP52429 567 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 NFIL3Q16649 462 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 PLK5Q496M5 336 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 LY6G5CQ5SRR4 150 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 SNX30Q5VWJ9 437 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 INTS8Q75QN2 995 aaKnown RBP15.18■□□□□ 0.02
VMP1-206ENST00000587945 GPRIN1Q7Z2K8 1008 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 UNC93AQ86WB7 457 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 DDX42Q86XP3 938 aaKnown RBP eCLIP15.18■□□□□ 0.02
VMP1-206ENST00000587945 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
VMP1-206ENST00000587945 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
VMP1-206ENST00000587945 KIAA1958Q8N8K9 716 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 TSTD1Q8NFU3 115 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 CSNK1G1Q9HCP0 422 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 RXFP3Q9NSD7 469 aa15.18■□□□□ 0.02
VMP1-206ENST00000587945 DENND4CQ5VZ89 1909 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 E2F8A0AVK6 867 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 SLC30A4O14863 429 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 EPN2O95208 641 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 TBX18O95935 607 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 ADH1CP00326 375 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 FAM200BP0CF97 657 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 CD58P19256 250 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 PSMC2P35998 433 aaKnown RBP15.17■□□□□ 0.02
VMP1-206ENST00000587945 KDSRQ06136 332 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 ADAM9Q13443 819 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 ZCWPW2Q504Y3 356 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 TTC30AQ86WT1 665 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 BBS7Q8IWZ6 715 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 NAT16Q8N8M0 369 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 LOXL4Q96JB6 756 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms