RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 SCML2Q9UQR0 700 aa12.38□□□□□ -0.43
PRKCSH-206ENST00000587509 CCL26Q9Y258 94 aa12.38□□□□□ -0.43
PRKCSH-206ENST00000587509 CPQQ9Y646 472 aa12.38□□□□□ -0.43
PRKCSH-206ENST00000587509 F5P12259 2224 aa12.38□□□□□ -0.43
PRKCSH-206ENST00000587509 TICRRQ7Z2Z1 1910 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 TNFRSF10BO14763 440 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 TLR5O60602 858 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 ADH1CP00326 375 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 RALAP11233 206 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 VDRP11473 427 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 ACO1P21399 889 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 CCR3P51677 355 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 RAD23BP54727 409 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 BST2Q10589 180 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 GRSF1Q12849 480 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 GOLGA7BQ2TAP0 167 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 DPCR1Q3MIW9 517 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 PREPLQ4J6C6 727 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 TMEM270Q6UE05 265 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 SASS6Q6UVJ0 657 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 C1orf210Q8IVY1 113 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 SYNPOQ8N3V7 929 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 ANKRD52Q8NB46 1076 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 WHAMMQ8TF30 809 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 CLDN23Q96B33 292 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 OTUB2Q96DC9 234 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 ZFYVE19Q96K21 471 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 FAM83CQ9BQN1 747 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 UBXN6Q9BZV1 441 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 INTS2Q9H0H0 1204 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 GKN1Q9NS71 199 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 LMBRD1Q9NUN5 540 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 TMEM30AQ9NV96 361 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 IL37Q9NZH6 218 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 LSM7Q9UK45 103 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 DENND4CQ5VZ89 1909 aa12.37□□□□□ -0.43
PRKCSH-206ENST00000587509 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 KIF26AQ9ULI4 1882 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 H0Y858 1186 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 LEFTY2O00292 366 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 PI15O43692 258 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 CD72P21854 359 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 MFAP3P55082 362 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 PPP1R26Q5T8A7 1209 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 SIX6OS1Q8N1H7 587 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 ZMIZ2Q8NF64 920 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 SCAMP5Q8TAC9 235 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 GOLGA1Q92805 767 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 TATDN2Q93075 761 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 CHRDQ9H2X0 955 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 EBF3Q9H4W6 596 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 CYLDQ9NQC7 956 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 SMPD4Q9NXE4 827 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 GTSE1Q9NYZ3 720 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 DLGAP2Q9P1A6 1054 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 TSPAN16Q9UKR8 245 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 FBXO4Q9UKT5 387 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 STRIP2Q9ULQ0 834 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 GREB1Q4ZG55 1949 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 PATJQ8NI35 1801 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 COL4A2P08572 1712 aa12.36□□□□□ -0.43
PRKCSH-206ENST00000587509 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 E2F8A0AVK6 867 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 PES1O00541 588 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 COCHO43405 550 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 MED7O43513 233 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 ZDHHC11BP0C7U3 371 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 KRT5P13647 590 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 DRD1P21728 446 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 ATP5C1P36542 298 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 NRLP54845 237 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 TNK2Q07912 1038 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 STX1AQ16623 288 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 EXOC3L4Q17RC7 722 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 ZNF528Q3MIS6 628 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 FBXO43Q4G163 708 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 KLHDC10Q6PID8 442 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 RBBP8NLQ8NC74 664 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 EHBP1Q8NDI1 1231 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 SLC22A12Q96S37 553 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 CYP2S1Q96SQ9 504 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 FAM126AQ9BYI3 521 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
PRKCSH-206ENST00000587509 ECT2Q9H8V3 914 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms