RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IGKV6-21A0A0C4DH24 114 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 DNALI1O14645 258 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 CREB1P16220 341 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 FCGRTP55899 365 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 SARNPP82979 210 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 EFHC2Q5JST6 749 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 ZNF618Q5T7W0 954 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 WDTC1Q8N5D0 677 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 CD101Q93033 1021 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 DDIT4Q9NX09 232 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 KIAA1257Q9ULG3 409 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 IPPQ9Y573 584 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 PDE1BQ01064 536 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 RAB6CQ53S08 254 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 C9orf57Q5W0N0 161 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 PIGZQ86VD9 579 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 SENP8Q96LD8 212 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 SH3GL2Q99962 352 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 PITPNM3Q9BZ71 974 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 RAB6CQ9H0N0 254 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 CXCL16Q9H2A7 254 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 CYTH4Q9UIA0 394 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 RBL1P28749 1068 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 CD52P31358 61 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 OR1G1P47890 313 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 TKTL1P51854 596 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 SLC6A3Q01959 620 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 SNRNP25Q9BV90 132 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 GPBP1L1Q9HC44 474 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 DCTN4Q9UJW0 460 aa12.98□□□□□ -0.33
SMARCA4-208ENST00000585799 TRPA1O75762 1119 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 SUN1O94901 812 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 AUHQ13825 339 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 LGSNQ5TDP6 509 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 PCGF5Q86SE9 256 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 PPIL6Q8IXY8 311 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 ZDHHC18Q9NUE0 388 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 BAIAP2L1Q9UHR4 511 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 EVPLQ92817 2033 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 TRUB2O95900 331 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 CYP2F1P24903 491 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 GRIK1P39086 918 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 DRG2P55039 364 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 SEC16BQ96JE7 1060 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 MTG1Q9BT17 334 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 FOCADQ5VW36 1801 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 CCDC195A0A1B0GUA6 201 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 UPP2O95045 317 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 ALDH3A1P30838 453 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 CRHR2Q13324 411 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 GRB14Q14449 540 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 APOL2Q9BQE5 337 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 SYT15Q9BQS2 421 aa12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 ZC3H7BQ9UGR2 993 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-208ENST00000585799 KAT6AQ92794 2004 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ATP9BO43861 1147 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 FAM107AO95990 144 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 HMBSP08397 361 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ZBTB48P10074 688 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ECHS1P30084 290 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 CDKN2BP42772 138 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 GPD2P43304 727 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ZNF143P52747 638 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 DENND5BQ6ZUT9 1274 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ADAM2Q99965 735 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ABI2Q9NYB9 513 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 KCNK1O00180 336 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 AVILO75366 819 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 PNPLA4P41247 253 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 TPI1P60174 286 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 FKBP1BP68106 108 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 TSPY1Q01534 308 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 DNAJC3Q13217 504 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 FYB2Q5VWT5 728 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 PDZD4Q76G19 769 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 DEPDC1BQ8WUY9 529 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 KIF9Q9HAQ2 790 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 PCDH9Q9HC56 1237 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
SMARCA4-208ENST00000585799 NDC80O14777 642 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 USP17L7P0C7H9 530 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 BRCC3P46736 316 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 GDF10P55107 478 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 SREBF2Q12772 1141 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms